Pairwise Alignments

Query, 393 a.a., phosphoribosylglycinamide formyltransferase 2 from Vibrio cholerae E7946 ATCC 55056

Subject, 1075 a.a., carbamyl phosphate synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 55.5 bits (132), Expect = 7e-12
 Identities = 53/262 (20%), Positives = 110/262 (41%), Gaps = 13/262 (4%)

Query: 59  FDMLDADALQQVIDLEKPHFVVPEIEA-IATSKLVELEAQGLNVVPTANATRLTMNREGI 117
           FD L  + +  +++LE PH V+      I  +  + L+AQ ++++ T  + +   N E  
Sbjct: 620 FDELTFERVMDILELENPHGVIVSTGGQIPNNLALRLDAQNIHILGT--SAQSIDNAEDR 677

Query: 118 RRLAA--EELGLPTSAYQFADSYESFAAAVETIGLPCVCKPVMSSSGKGQSVIRTPEQIE 175
            + +A  + +G+    ++   S E     V+ +G P + +P    SG   +V    E++E
Sbjct: 678 EKFSAMLDRIGVDQPRWRELTSLEDINEFVDEVGFPVLVRPSYVLSGAAMNVCSNQEELE 737

Query: 176 AAWQYAQQGGRSGAGRVIVEGFVDFDYEITLLTVRAVDGVHFCAPIGHRQE-----DGDY 230
              + A    +     V+V  F++   E+ +  V A +G      I    E      GD 
Sbjct: 738 RFLKLAANVSKKHP--VVVSQFIEHAKEVEMDAV-AQNGEIIAYAISEHIEFAGVHSGDA 794

Query: 231 RESWQPQVMSENAIKAAEYVAEQVVNALGGYGLFGVELFVKGDKVIFNEVSPRPHDTGMV 290
              + PQ +    ++  + ++ ++  AL   G F ++   K + +   E + R   +   
Sbjct: 795 TIQFPPQKLYVETVRRIKRISREIAKALNISGPFNIQYLAKDNDIKVIECNLRASRSFPF 854

Query: 291 TLISQELSEFALHVRAFTGLPI 312
                +++   L  +   GLP+
Sbjct: 855 VSKVLKINFIELATKVMLGLPV 876



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 31/221 (14%)

Query: 9   RDNATRVLLLGSGEL-----------GKEVAIECQRLGLEVIACD-RYADAPAMQVAHRS 56
           ++N  +VLLLGSG L           G +     +  G+E I  +   A     +     
Sbjct: 2   KENIKKVLLLGSGALKIGEAGEFDYSGSQALKALKEEGIETILINPNIATVQTSEGVADQ 61

Query: 57  HVFDMLDADALQQVIDLEKPHFVVPEIEA-------IATSKLVELEAQGLNVVPT-ANAT 108
             F  +    +++VI  EKP  ++            +A  K   LE   + V+ T   A 
Sbjct: 62  IYFLPVTPYFVEKVIQKEKPEGIMLAFGGQTALNCGVALYKEGILEKYNVKVLGTPVQAI 121

Query: 109 RLTMNRE-GIRRLAAEELGLPTSAYQFADSYESFAAAVETIGLPCVCKPVMSSSGKGQSV 167
             T +RE  +++L   E+ + T   +  ++ E    A + +G P + +   +  G G   
Sbjct: 122 MDTEDRELFVQKL--NEINVKTIKSEAVENAEDARRAAKELGYPVIVRAAYALGGLGSGF 179

Query: 168 IRTPEQIEAAWQYAQQGGRSGAGRVIVE----GFVDFDYEI 204
               EQ++   + A     S + +V+VE    G+ + +YE+
Sbjct: 180 CDNEEQLDVLVEKA----FSFSPQVLVEKSLRGWKEVEYEV 216