Pairwise Alignments

Query, 259 a.a., phosphoribosylglycinamide formyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (488), Expect = 6e-54
 Identities = 113/252 (44%), Positives = 155/252 (61%), Gaps = 5/252 (1%)

Query: 1   MSLLLRTTALMLLLLSRAPAMAAVPLTTNSTEDNREESQQNEVSSKLFRHSLSGLYGIAN 60
           M+ L R   + LLL+S   A+A      ++  D +EES       + F     GL+ IA+
Sbjct: 1   MNKLFRPFFIFLLLVSTRSALAT---NYDALIDTKEESGCY-AQKQSFSKDQHGLHAIAS 56

Query: 61  QNYPIV-QPYQDFDVLYSKAHQAQIELETLCKSTALLTHTQAYFAGTKSRQRALEKVELE 119
            +  ++ Q   D D LY++A  AQ EL +L +        Q      KS +RA  K+  +
Sbjct: 57  SSAALIRQSSDDLDSLYAQAQNAQQELTSLLEGLNTQESYQLLIPEVKSYERAKAKIAAK 116

Query: 120 LDGQAERITDLARATIVAHDVASLVTAYETLSREATVVKVKNRFKNPAESGYRDLNVLVQ 179
            DG A RITDLARA++VA+D+  L+TA+E L ++  V++VKNRF  P  SGYRDLN+LVQ
Sbjct: 117 FDGDASRITDLARASLVANDIQGLMTAFEDLQQQVKVLQVKNRFAEPKVSGYRDLNLLVQ 176

Query: 180 LPKTGIIAEVQLHLAAIAQVKSGAEHELYEQIQTIERTARQEQRELTEWENAQIAKMRSA 239
           LP+TG+IAEVQLHL AIA++KSG EH+ YEQIQTIE  A  + R+L++ E AQI  +R A
Sbjct: 177 LPQTGMIAEVQLHLKAIAEIKSGEEHKAYEQIQTIEARAMAQSRDLSQLELAQITHLRQA 236

Query: 240 SRDLYQQAWQPY 251
           S   Y +AW  Y
Sbjct: 237 SHKQYHKAWLYY 248