Pairwise Alignments

Query, 259 a.a., phosphoribosylglycinamide formyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  202 bits (515), Expect = 4e-57
 Identities = 117/252 (46%), Positives = 155/252 (61%), Gaps = 6/252 (2%)

Query: 1   MSLLLRTTALMLLLLSRAPAMAAVPLTTNSTEDNREESQQNEVSSKLFRHSLSGLYGIAN 60
           M+ L RT  + LLLLS    +A  PL  N +   R      +  S    H L GLY +++
Sbjct: 1   MNKLFRTFFIFLLLLSTRTGVAN-PLVINDSTAERGSYSARQAQS----HDLHGLYALSS 55

Query: 61  QNYPIVQPYQD-FDVLYSKAHQAQIELETLCKSTALLTHTQAYFAGTKSRQRALEKVELE 119
           Q +   +   +  D LY  AH AQ EL  L +     + T A     KS QRA EKV  +
Sbjct: 56  QTFDTPRQSSNCLDNLYLGAHAAQHELGNLLQKITTHSQTHAILPEVKSYQRAAEKVASK 115

Query: 120 LDGQAERITDLARATIVAHDVASLVTAYETLSREATVVKVKNRFKNPAESGYRDLNVLVQ 179
            +G A +ITDLARA+IVA  ++ L+ AY TLS +  VVK+KNRF  P  SGYRDLN+LV+
Sbjct: 116 FNGDASQITDLARASIVADSISELMQAYYTLSEQTQVVKLKNRFAEPKASGYRDLNLLVR 175

Query: 180 LPKTGIIAEVQLHLAAIAQVKSGAEHELYEQIQTIERTARQEQRELTEWENAQIAKMRSA 239
           LP++G+IAEVQLHL  IA +KSG EH++YEQ+Q IE  A ++ R+L+E+E AQIAK+R  
Sbjct: 176 LPESGMIAEVQLHLKEIADIKSGPEHKVYEQVQQIEANALKQHRQLSEFETAQIAKLRQE 235

Query: 240 SRDLYQQAWQPY 251
           S  LY +AW  Y
Sbjct: 236 SHKLYHKAWLNY 247