Pairwise Alignments

Query, 98 a.a., integration host factor subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 95 a.a., integration host factor, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.4 bits (176), Expect = 1e-18
 Identities = 34/95 (35%), Positives = 60/95 (63%), Gaps = 1/95 (1%)

Query: 3  LTKAELAEALF-EQLGMSKRDAKDTVEVFFEEIRKALESGEQVKLSGFGNFDLRDKNERP 61
          +TK+EL E L   Q  +S ++ +  ++   E++   LESG+++++ GFG+F L  +  R 
Sbjct: 1  MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRT 60

Query: 62 GRNPKTGEDIPITARRVVTFRPGQKLKARVENIKV 96
          GRNPKTG  + +  + V  F+PG++L+ RV+ + V
Sbjct: 61 GRNPKTGSSVELEGKYVPHFKPGKELRERVDAVNV 95