Pairwise Alignments

Query, 98 a.a., integration host factor subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 95 a.a., DNA-binding protein HU (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 70.9 bits (172), Expect = 3e-18
 Identities = 33/89 (37%), Positives = 55/89 (61%)

Query: 3  LTKAELAEALFEQLGMSKRDAKDTVEVFFEEIRKALESGEQVKLSGFGNFDLRDKNERPG 62
          LTKAE+ +A++E+   ++ + K  VE     +++A++    + +SGFG F+  DK  R G
Sbjct: 5  LTKAEIVDAIYEKTDRNRAEVKGVVESLLGIMKQAIKKDHALLISGFGKFEAYDKKARKG 64

Query: 63 RNPKTGEDIPITARRVVTFRPGQKLKARV 91
          RNP+T E I +  R+VV FR  +K +A +
Sbjct: 65 RNPQTDETITLPPRKVVVFRLSRKFRAEL 93