Pairwise Alignments

Query, 795 a.a., phenylalanine--tRNA ligase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., phenylalanine--tRNA ligase subunit beta from Methanococcus maripaludis JJ

 Score = 82.4 bits (202), Expect = 6e-20
 Identities = 116/537 (21%), Positives = 207/537 (38%), Gaps = 47/537 (8%)

Query: 158 IDVDLTSNRADCFSIRGLAREVGVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYL 217
           +   +  +R D  S+ GLAR  G      +T       V  I+  I + V+     P   
Sbjct: 52  VQFSINPDRPDYLSVEGLAR--GFRGFMGITTGIQEFEV--IDSDIKVTVEENETRPYVA 107

Query: 218 GRIVKNV---NVQAQTPLWMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEG 274
             +VKNV   ++  ++ + +QEKL     R    +              +H FD  K++ 
Sbjct: 108 FALVKNVLMDDLVLESMINLQEKLHWAIGRDRKKLAI-----------GIHDFD--KVKA 154

Query: 275 GIVVRLAEQDEKLTLLDGSEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLE 334
               +  + DE   +  G E +      +I   +K +  A +   +   +  D    +L 
Sbjct: 155 PFTYKEIKGDEIKFVPLGYENEEMTPREIIEKHEKGIKYAHLIQDDKFPIIVDVNGEVLS 214

Query: 335 CAFFAPDHIRGRARSYGLHTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAA 394
                P  I G        + + +    G +       +      L E  G  V+  V  
Sbjct: 215 M----PPIINGTLTKVTPTSKNLLIDITGTEKEAVEETLNIIVCALAERRGTIVSVDVNG 270

Query: 395 ESAADLPKPNQVALRRSKLDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFD 454
           +   DL   +++    S ++K LG  +   ++++ +++ GM             P +R D
Sbjct: 271 KKYPDLTPKSRIISVES-INKKLGLNLNPGEIIQAVKKSGMDALYEDGNLIVKIPAYRND 329

Query: 455 IAIEQDLVEEVGRIYGYNNIPNQAPVAALNMNLHNEAKLPLKRVRDLLVDRGYQEAITYS 514
           I    DL EE+   YGY     + P  A   +  +  +     + DL++  G+ E +  +
Sbjct: 330 ILHNVDLKEEIAINYGYEKFEGKLPSVATTGS-KDPVEKKCSAMSDLMIGLGFYEVMNLT 388

Query: 515 FVEP----EQQKLVVPGVDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLF 570
                   E+  L V   D + +  P S E   +R S++  LL T+  N+    P+ ++F
Sbjct: 389 LSNQDTLFEKMNLKVDEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHNALPQ-KIF 447

Query: 571 EYGLRFI---PDAAAENGMRQEPMLAGVISGARGEEHWNMETATVDFFDMKGDLEAVLEL 627
           E G   +    D   +   +    +AG I+               +F ++K   EA+L  
Sbjct: 448 EVGDCVVIDEEDTETDTKCKNIKKIAGAITHP-----------LTNFNEIKSSTEALLRE 496

Query: 628 TAKGKAYSFAATKHPALHPGQAAAIMVDGKAIGVIGTVHPELERKFGLNGRTIVFEI 684
             +G  + F   +HPA   G+ A I+  GK +G  G +HPE+   F L    + FEI
Sbjct: 497 FFEG--FEFENYEHPAFIAGRCAKILKSGKEVGFFGEIHPEVILNFELEHPVVGFEI 551