Pairwise Alignments

Query, 795 a.a., phenylalanine--tRNA ligase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 820 a.a., phenylalanyl-tRNA synthetase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  407 bits (1046), Expect = e-117
 Identities = 264/822 (32%), Positives = 433/822 (52%), Gaps = 30/822 (3%)

Query: 1   MKFSESWLREWVNPAITTDELTHQITMAGLE---VDDVLAVAGVFDGVKVGHVVECAQHP 57
           M  S +WL+E+VN  +T DE    +T  GLE   V++V  + G  +G+ +G V+ C +HP
Sbjct: 1   MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60

Query: 58  DADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATL-PGD--FKIKKAKLRGQP 114
           ++D L +T V++G+ E + IVCGA N   G KV VAT+G  L  GD  F IKK+K+RG  
Sbjct: 61  NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120

Query: 115 SHGMLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSL-NDVTIDVDLTSNRADCFSIR 173
           S GM+C+  E+GI  +  GI+ L   A  G   +D+ ++ +D  ++VD+T NRAD  S  
Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPAEAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180

Query: 174 GLAREVGVL-----NRADVTAPAVNAIVATINDT-ISIDVKAPAACPRYLGRIVKNVNVQ 227
           G+AR++         +A +  P+V+      +D  I + V+   ACP Y G  VK V V+
Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLDIEVVVENSEACPHYAGVTVKGVTVK 240

Query: 228 AQTPLWMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGG-IVVRLAEQDEK 286
            ++P W+Q KLR  G+R I+ VVDITN+++   GQP+H FD  KI+G  ++V+   +   
Sbjct: 241 -ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTLPEGTP 299

Query: 287 LTLLDGSEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGR 346
              LD  E KL+   L+I ++++A+ IAGVFGG  SG +  T DV +E A+F P  +R  
Sbjct: 300 FVTLDEVERKLSERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKT 359

Query: 347 ARSYGLHTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQV 406
           AR +GL+TD+S RFERG+D       ++ A  ++ E+ GG ++  +     A +P+   V
Sbjct: 360 ARRHGLNTDASFRFERGIDPNGVIYCLKLAALMVKELAGGTISSEIKDVCVA-VPQDFMV 418

Query: 407 ALRRSKLDKLLGHAIPDADVVEILERLGMQV-ETTAEGWQATAPTWRFDIAIEQDLVEEV 465
            L   K++ L+G  IP   +  I+  L M++   T +G     P +R D+  + D++E++
Sbjct: 419 ELSYEKVNSLIGKVIPVETIKSIVTSLEMKIMNETVDGLTLAVPPYRVDVQRDCDVIEDI 478

Query: 466 GRIYGYNN--IPNQAPVAALNMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKL 523
            RIYGYNN  IP     +      H+++      V + LV  G+ E +  S         
Sbjct: 479 LRIYGYNNVEIPTTLNSSLTTKGEHDKSNKLQNLVAEQLVGCGFNEILNNSLTRAAYYDG 538

Query: 524 V--VPGVDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAA 581
           +        ++L NP+SA+++ MR +L+ G L ++ HN  R+   ++ FE+G  +  DA 
Sbjct: 539 LENYSSNHLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCYYFDAD 598

Query: 582 AENGMR------QEPMLAGVISGARGEEHWNMETATVDFFDMKGDLEAVLELTAKGKAYS 635
            +N  +      ++  L   ++G +    W         +++K  +E +L+         
Sbjct: 599 KKNPEKVLATYSEDYHLGLWVTGKKVANSWAHPDENSSVYELKAYVENILKRLGLDLHNL 658

Query: 636 FAATKHPALHPGQAAAIMVDGKAIGVIGTVHPELERKFGLNGRTIVFEIEWNAINTRVIP 695
                   +     +     GK +   G V  +L + F ++      ++ W  +   +  
Sbjct: 659 VVGNLTDDIFATALSVHTKGGKRLASFGVVTKKLLKAFDIDNEVYYADLNWKELMKAIRS 718

Query: 696 EAAA---ISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEG 752
              +   ISKFPA +RD+AL++D N+   +I +       +LLK+ +LFDVY GK +E G
Sbjct: 719 VKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYDTEKKLLKEVELFDVYEGKNIEAG 778

Query: 753 KKSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794
           KKS A++  LQ   +TL +  I   +  +V+ +  +  A LR
Sbjct: 779 KKSYAVSFLLQDETQTLNDKMIDKIMSKLVKNLEDKLNAKLR 820