Pairwise Alignments

Query, 327 a.a., phenylalanine--tRNA ligase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., O-phosphoserine--tRNA ligase from Methanococcus maripaludis JJ

 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 17/172 (9%)

Query: 163 KLMLRTH-TSG--VQIRTLEERQP-PLRFIAPGRVYRNDY--DQTHTPMFHQVEGMLVDE 216
           KL LR+H TSG  + +  L  ++P P +  +  R +R +   D++H   +H     +  E
Sbjct: 180 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGE 239

Query: 217 NVNFAQLKGILHDFLCNFFEEDLEVRFRPSYFPFTEPSAEVDVKGKNGK---WLEVLGCG 273
            V+    K I    L  F   + +         +  P  + +V   + K   WLEV   G
Sbjct: 240 GVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFG 299

Query: 274 MVHPNVLRSVGIDPEKYSGFAFGMGVERLTMLRYGVNDLR-----AFFENDL 320
           +  P  L   GID    +    G+GVERL M+     D+R      F+E+ L
Sbjct: 300 VYSPVALSKYGIDVPVMN---LGLGVERLAMISGNFADVREMVYPQFYEHKL 348



 Score = 31.6 bits (70), Expect = 5e-05
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 60  INVAKEAVQKALAERKDALQSAELEAKLAAETIDVTLPGRRIENGGLHPVTRTIERIESF 119
           I +A +  +KA  E KD ++         A+ I+ + P  +   G  HPV  TIE +   
Sbjct: 8   IEMANKDFEKAWIETKDLIK---------AKKINESYPRIKPVFGKTHPVNDTIENLRQA 58

Query: 120 FGELGFTVESGPEIEDD 136
           +  +GF     P I D+
Sbjct: 59  YLRMGFEEYINPVIVDE 75