Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (289), Expect = 1e-30
 Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 19/208 (9%)

Query: 166 LFDQVSERNRELVKLNQSLEEKVIERTQQLYQVNRQLEA-------LSMTDSLTGLPNRR 218
           LF+Q+ +RN+       SLE  + ERT++L +VN QL+        L+ TD+LT + NR 
Sbjct: 155 LFEQLEQRNK-------SLEAIIEERTRELSRVNHQLQIQLDENRRLAETDALTRVANRY 207

Query: 219 KAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSD 278
           +  + L L    AQ  ++P   + +D+D FK +ND +GH  GD  L  +   ++   R  
Sbjct: 208 RLEQALPLACERAQRFREPLSLIAMDVDDFKDINDRYGHAFGDAALVQVVQSVKRCQRDG 267

Query: 279 DLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISLENNIRWQGSVSMGVAAFAS 338
           DL+ R GGDEF++I P T  A    +AE + R +   +   +    +Q ++S GV     
Sbjct: 268 DLLVRWGGDEFIMILPNTTLADARLLAESIRRGLSDLLPVGD----FQITMSFGVVQRLE 323

Query: 339 NMKDHHELLRAADQAVYLAKNSGKNRVC 366
           N + H  LL  ADQA+Y +K SGKN +C
Sbjct: 324 N-EQHATLLHRADQALYRSKMSGKNVIC 350