Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (286), Expect = 6e-30
 Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 13/249 (5%)

Query: 124 IDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVKLNQS 183
           +D  +  QV  ++S +   +     ++      E LL  ++    Q  +R +E+    +S
Sbjct: 443 MDTQIREQVDGLQSSVKDADDLEGLKQVLENHLEGLLGTMDHHRQQRDQREQEVSARLKS 502

Query: 184 LEEKVIERTQQLYQVNRQLEAL---SMTDSLTGLPNRRKAMRQL---VLHWNLAQDNQQP 237
           L ++V    Q    V   LE     ++ D LTGLPNR     +L   V  W   Q +   
Sbjct: 503 LADRVALMEQDAQVVRENLEEQRQKALIDPLTGLPNRAAWSERLEHEVAQW---QQHGNS 559

Query: 238 FVCVMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETN 297
            +  M+D+D FK +ND++GH  GD+VL  IA++LR   RS D + R GG+EF+++ P T+
Sbjct: 560 LLLAMLDLDHFKRINDNYGHLAGDRVLKLIASVLRKRLRSGDFIARFGGEEFVLLVPNTS 619

Query: 298 TAGGVYIAEQVCRAIQQQVISLENNIRWQGSVSMGVAAFASNMKDHHEL-LRAADQAVYL 356
            A G  +AE +  AI+      +       +VS+G+ AF     +H +L L+ ADQA+Y 
Sbjct: 620 LAAGAKLAEALRLAIEGCPFHFKGE-PVTVTVSIGLTAFKPG--EHSDLVLKRADQALYR 676

Query: 357 AKNSGKNRV 365
           AK+SG+N V
Sbjct: 677 AKSSGRNHV 685