Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 794 a.a., CHASE domain/PAS domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (276), Expect = 1e-28
 Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 5/177 (2%)

Query: 189 IERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGF 248
           I     L +V  +L ALS+TD+LTG+ NRR    +L       +        +M+DID F
Sbjct: 618 ISDISDLKRVEEELRALSVTDALTGIRNRRYFQERLTSEMARVERGSGGLAVIMLDIDHF 677

Query: 249 KAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQV 308
           K +ND HGH VGD+VL  +   +    R  D+ CRLGG+EF+V+CP+T++     +A ++
Sbjct: 678 KRINDQHGHAVGDRVLQAVCQRVAQRLRRTDVFCRLGGEEFVVLCPDTDSDSAYTLALEL 737

Query: 309 CRAIQQQVISLENNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRV 365
              ++   I     +    + S G+A + +  +    LL  AD  VY AK +G++RV
Sbjct: 738 WEGLRAAPIEGVGFV----TASFGIATWRAG-EGADALLLRADSGVYAAKQAGRDRV 789