Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (275), Expect = 9e-29
 Identities = 66/173 (38%), Positives = 98/173 (56%), Gaps = 2/173 (1%)

Query: 195 LYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDH 254
           L +    LE ++  DSLTGL NRR   R L + +      + P   +M+DID FK  ND 
Sbjct: 334 LRKAQEALELIATHDSLTGLANRRLFERALDVEFGRGARQRSPLSLIMLDIDFFKRYNDA 393

Query: 255 HGHDVGDKVLTTIANMLRD-HFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQ 313
           +GH  GD  L  +A +L+D   R  DL  R GG+EF V+ P+TN +G + +AEQ+ R++ 
Sbjct: 394 YGHVAGDHCLAEVAKVLKDCCHRKADLAVRYGGEEFAVLLPDTNLSGAMALAEQIRRSVI 453

Query: 314 QQVISLENNIRWQGSVSMGVAAFASNMKDHHEL-LRAADQAVYLAKNSGKNRV 365
            + I    +     +VS+G  AF  +  D  E+ ++ AD A+Y AK +G+NRV
Sbjct: 454 DKHIIHSGSPTGYLTVSLGCYAFVPSSLDSIEVFIQRADAALYQAKYNGRNRV 506