Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  108 bits (270), Expect = 6e-28
 Identities = 67/175 (38%), Positives = 96/175 (54%), Gaps = 12/175 (6%)

Query: 201 QLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHDVG 260
           Q++ LSM D+LTGLPNR K  R L     +A+++  P   +M+D+D FK +ND  GH  G
Sbjct: 425 QVQHLSMHDALTGLPNRNKLARHLD-DALVAKEHSAPLTLLMVDLDNFKPINDSLGHPAG 483

Query: 261 DKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISLE 320
           D VL  +A  LRD  R  DLV RLGGDEF+V+        G+    ++ R  ++ + SL+
Sbjct: 484 DAVLLEVAQRLRDCTREQDLVARLGGDEFVVV------LNGMEHTTEIDRFCERLIDSLQ 537

Query: 321 NNIRWQG-----SVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRVCAFGA 370
             I ++        S+G+A          EL+R AD A+Y AK+ GK   C F +
Sbjct: 538 QPILYETHSLHIGASIGIAVSRRQGYVPGELIRCADIALYQAKSEGKKTWCYFAS 592