Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score =  124 bits (311), Expect = 4e-33
 Identities = 71/179 (39%), Positives = 105/179 (58%), Gaps = 3/179 (1%)

Query: 188 VIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDG 247
           V     QL   N QL+ LS TD LTGL NR      L   +   Q        VM+DID 
Sbjct: 137 VATNRHQLQAANAQLQLLSSTDRLTGLYNRGHWESDLKAAYARHQRYGHALSLVMLDIDH 196

Query: 248 FKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQ 307
           FK VND +GH  GDKV+  +A +LR+H R  D+V R GG+EF V+  +T+++G    AE+
Sbjct: 197 FKRVNDTYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLSDTDSSGAHAFAER 256

Query: 308 VCRAIQQ-QVISLENNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRV 365
           +  +++  +V+  +  IR+  ++S+GVA  +    DH +L+  ADQA+Y +K +G+NRV
Sbjct: 257 MRHSVEALEVLYNDQTIRF--TISLGVADLSQPSNDHADLIARADQALYTSKKTGRNRV 313