Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 969 a.a., diguanylate cyclase/phosphodiesterase from Pseudomonas syringae pv. syringae B728a

 Score =  113 bits (283), Expect = 2e-29
 Identities = 84/259 (32%), Positives = 128/259 (49%), Gaps = 20/259 (7%)

Query: 116 WLAYHILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNR 175
           WL   +   D    R V+ ++S  S + +Y   ++E       LL  ++   D    R  
Sbjct: 460 WLGIPLF--DGGQVRGVLVVQS-YSKDVSYTLRDQE-------LLTFVSRHIDTALSRRS 509

Query: 176 ELVKL---NQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQ 232
               +   N  LE +V +RT++L + N +L+  +  DSLTGLPNR     +L   W    
Sbjct: 510 AAEAIHTANVLLEARVRDRTRELDRANARLQHENSHDSLTGLPNRSHLQYRLRQAWQDFC 569

Query: 233 DNQQPFVCVMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVI 292
            N Q  + + ID+D FK +ND  GH  GD +L   A  LR   R  DL+ RLGGDEF V+
Sbjct: 570 RNGQQVIVMFIDLDRFKMINDSLGHHCGDILLVQAAERLRSCMRERDLLARLGGDEFAVL 629

Query: 293 CPETNTAGGVYIAEQVCRAIQQQVISLENNIRWQGSVSMGVAAFASNMKDHHE---LLRA 349
             +T    G  IA+++  A +Q  +  ++ +    S S+GV    ++++ H E   LLR 
Sbjct: 630 SIDTPLQTGTEIAQRILTAFEQPFVIDDHTV--FSSCSIGVV--GADIRFHQEPADLLRD 685

Query: 350 ADQAVYLAKNSGKNRVCAF 368
           AD A+Y  KN G++    F
Sbjct: 686 ADTAMYRVKNGGRDSFAVF 704