Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 849 a.a., PAS domain S-box protein from Synechocystis sp000284455 PCC 6803

 Score =  110 bits (275), Expect = 1e-28
 Identities = 77/229 (33%), Positives = 117/229 (51%), Gaps = 14/229 (6%)

Query: 145 YAKEEREKNAATEPLLNALNALFDQVSERNRE---LVKLNQSLE--EKVIERTQ-QLYQV 198
           YA   RE +  T       +     +++R  E   L+K  +  E  E+ +++ Q +L + 
Sbjct: 611 YATPRRESDGGT-----IWHGYIKDITDRKEEEYLLIKAKERAETAEQTLQKAQIRLERF 665

Query: 199 NRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHD 258
           N++L  L   D LT + NRR    ++   W      Q P   +M DID FK  ND +GH 
Sbjct: 666 NKKLSQLIDIDGLTKIANRRCFNVRIKQEWRRLSRAQVPISLIMFDIDCFKNYNDRYGHP 725

Query: 259 VGDKVLTTIANMLRD-HFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVI 317
            GD  L  +A   R    R  DLV R GG+EF V+ PET+T G + +AE++ +AI Q  I
Sbjct: 726 EGDLCLIRVAQAARKAASRPADLVARFGGEEFAVLLPETDTKGAIMVAEKIIQAISQLAI 785

Query: 318 SLE-NNIRWQGSVSMGVAA-FASNMKDHHELLRAADQAVYLAKNSGKNR 364
           + E + I  Q ++S+G+   F S       L++ AD A+Y AK  G+N+
Sbjct: 786 AHEASPISGQITISLGIGTQFPSKELISRTLIKQADMALYEAKRRGRNQ 834