Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 664 a.a., diguanylate cyclase with GAF sensor from Synechococcus elongatus PCC 7942

 Score =  120 bits (300), Expect = 1e-31
 Identities = 74/179 (41%), Positives = 100/179 (55%), Gaps = 3/179 (1%)

Query: 194 QLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVND 253
           QL   N+QL  L+ +D LTGL NRR   + L + W  A   Q P   ++IDID FK  ND
Sbjct: 479 QLAAANQQLLRLAQSDGLTGLANRRHFDQCLDIEWQRAIREQHPLGLILIDIDCFKQFND 538

Query: 254 HHGHDVGDKVLTTIANMLRDHF-RSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAI 312
            +GH  GD  L  +A  L     R  DLV R GG+EF+VI P TN  G + IAE +  A+
Sbjct: 539 TYGHQAGDDCLKAVATALTQVIARPADLVARYGGEEFVVILPNTNEQGILQIAESMRSAV 598

Query: 313 QQ-QVISLENNIRWQGSVSMGVAAFA-SNMKDHHELLRAADQAVYLAKNSGKNRVCAFG 369
           QQ ++    +++    S+S+G   +  +  K    L+ AADQA+Y AK  G+NRVC  G
Sbjct: 599 QQLKIPHRSSSVCSSVSLSLGAVTWVPTPHKSPEALIAAADQALYQAKELGRNRVCLAG 657