Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., response regulator PleD from Sinorhizobium meliloti 1021

 Score =  115 bits (288), Expect = 2e-30
 Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 1/172 (0%)

Query: 200 RQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHDV 259
           +Q   L++TD LTGL NRR     L L  + A    +P    + DID FK VND HGHD 
Sbjct: 284 QQTIELAVTDDLTGLHNRRYLENHLKLLIDRATTRGRPLSICITDIDRFKRVNDTHGHDA 343

Query: 260 GDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISL 319
           GD VL   AN +R   R  DL CR GG+EF+V+ P+T       +AE++  A++ +   +
Sbjct: 344 GDDVLREFANRVRATVRGADLACRFGGEEFVVVMPDTTPEMAAIVAERLRLAVESRGFDI 403

Query: 320 ENNIR-WQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRVCAFGA 370
                    + S+G+A    +      LL+ AD A+Y AKN G+NRV A  A
Sbjct: 404 PQAATVLNVTASLGIATLRPHGDTAEALLKRADMALYQAKNGGRNRVVAAAA 455