Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score =  108 bits (269), Expect = 3e-28
 Identities = 64/171 (37%), Positives = 100/171 (58%), Gaps = 7/171 (4%)

Query: 200 RQLEALSMTDSLTGLPNRR---KAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHG 256
           RQLE L+ +D LTGL NRR    A    VL  + A       V   +D+D FK++ND +G
Sbjct: 192 RQLETLAKSDPLTGLANRRGLLDAFGGAVLTRSRAPHRLSLLV---LDLDHFKSINDRYG 248

Query: 257 HDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQV 316
           H+ GD VL  +A++++   R++DL+ R+GG+EF ++ P+T+ AG   +AE++ +AI+   
Sbjct: 249 HEAGDGVLCHVAHVIKGMIRANDLIARIGGEEFALLLPDTDLAGAREVAEKIRKAIESTA 308

Query: 317 ISLENNIRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKNRVCA 367
           + +        +VS+GVA       D   L  +AD  +Y AK +G+NRV A
Sbjct: 309 L-IGPGGSLSVTVSIGVAELDPQYPDFAALFSSADHRLYQAKKAGRNRVSA 358