Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  117 bits (293), Expect = 9e-31
 Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 24/204 (11%)

Query: 181 NQSLEEKVIERT-------QQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQD 233
           N+ LE+ V ERT       ++L + N++L   +  DSLTG+ NR    ++L     L++ 
Sbjct: 421 NERLEQMVQERTLELEIALRELNEANQKLTEQNTVDSLTGVKNRAAFEKRLQAEGRLSRR 480

Query: 234 NQQPFVCVMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHF-RSDDLVCRLGGDEFLVI 292
            Q P   +MIDID FKA+ND +GH  GD+ L TIA  L++   R  DLV R GG+EF +I
Sbjct: 481 QQTPLAILMIDIDRFKAINDTYGHLAGDQALKTIAQALKEKLRRPSDLVSRFGGEEFAMI 540

Query: 293 CPETNTAGGVYIAEQVCRAIQ-------QQVISLENNIRWQGSVSMGVAAFASNMKDHHE 345
            P T+  G + +AE +   +        +Q I L        ++S+G+ A       H +
Sbjct: 541 LPNTSCDGALQVAELMRSTVSELPLAWGEQAIPL--------TISIGICAEVIVDDQHTQ 592

Query: 346 LL-RAADQAVYLAKNSGKNRVCAF 368
           LL   AD+A+Y AK+ G+NRVC +
Sbjct: 593 LLVDQADKALYRAKHEGRNRVCVY 616