Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  109 bits (272), Expect = 1e-28
 Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 14/258 (5%)

Query: 113 LIHWLAYHILGIDQNMARQVIAIRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSE 172
           LI   A+ +LG  +     +IA   G+ A   Y + +  +     P+   + ALF+ V E
Sbjct: 110 LIPPFAFFLLGRQRGSLVSLIAF--GVCAYIVYNQIQEAR-----PVTFGMGALFN-VIE 161

Query: 173 RNRELVKLNQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQ 232
            +   + L +  E       +QL + N +++ L+ TD LTGL NR K    L  +   ++
Sbjct: 162 VSIAHILLFRFYEGTRSSAYRQLGERNAKIQKLAETDKLTGLYNREKLDITLEEYVLQSR 221

Query: 233 DNQQPFVCVMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVI 292
             Q PF  +++D+D FK +ND HGH  GD+VL  +A+ LR   R  D + R GG+EF+++
Sbjct: 222 HRQTPFSLLILDVDYFKQINDAHGHLTGDRVLVQLADSLRSLCREGDFLARWGGEEFVIL 281

Query: 293 CPETNTAGGVYIAEQVCRAIQQQVISLENNIRWQGSVSMGVAAFASNMKDHHELLRAADQ 352
            PET  +  V +AEQ+ + I  Q    ++      ++S+G A    +      L+  AD 
Sbjct: 282 LPETQLSICVAVAEQLRQDIAAQKFDGQSL-----TISLGAAQLRED-DTTKTLVNRADN 335

Query: 353 AVYLAKNSGKNRVCAFGA 370
           A+Y AK++G+NRV A  A
Sbjct: 336 ALYQAKHTGRNRVVAEAA 353