Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (282), Expect = 2e-29
 Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 38/226 (16%)

Query: 168 DQVSERNRELVKLNQSLEEKVIERTQQLY------------------------QVNRQLE 203
           +Q+   N++L++L +  E +++   Q  Y                        Q ++ L 
Sbjct: 427 EQIERENQQLLELQKIKENELVILKQNKYLQLAVIVLGCIIMIILSIVAYKQSQKSKLLS 486

Query: 204 ALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHDVGDKV 263
            L++TD LT LPNRR    +   ++    +  QP   ++ D D FK VND +GHD+GDKV
Sbjct: 487 ILALTDHLTQLPNRRYTYSKGEGYFKSKDEGHQPLSIILFDADHFKKVNDKYGHDIGDKV 546

Query: 264 LTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISLENN- 322
           L  +AN+     R  DLV R+GG+EFLVI P T        AEQ     Q+ V ++E++ 
Sbjct: 547 LIALANISNGLMRKQDLVGRVGGEEFLVILPGTT-------AEQALNVAQRLVTTVESSN 599

Query: 323 -----IRWQGSVSMGVAAFASNMKDHHELLRAADQAVYLAKNSGKN 363
                + ++ ++S G+A      K    LL+ AD A+Y AK+SG+N
Sbjct: 600 FDDVYMNFKLTISAGIAC-TDGDKSFEHLLKRADDALYRAKSSGRN 644