Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 788 a.a., sensory box/GGDEF/GAF/EAL domain protein from Marinobacter adhaerens HP15

 Score =  112 bits (279), Expect = 5e-29
 Identities = 76/215 (35%), Positives = 113/215 (52%), Gaps = 8/215 (3%)

Query: 159 LLNALNALFDQVSERNRELVK-LNQSLEEKVIERTQQLYQVNRQLEALSMTDSLTGLPNR 217
           L N L+    +++E    L++ L   +E K +   +Q +Q   +LE  +  DSLTGLPNR
Sbjct: 311 LANRLDGYKPRLAEELEPLLQTLGNLIERKRLHHEKQQHQ--ERLEKAANYDSLTGLPNR 368

Query: 218 RKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHDVGDKVLTTIANMLRDHFRS 277
           R+         + A   Q       ID+DGFK +ND  GH VGD VL  I+  L+   R 
Sbjct: 369 RRLTEIFTQELHEANLRQGTVSLCFIDLDGFKGINDQQGHAVGDAVLKIISERLKATIRQ 428

Query: 278 DDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISLENNIRWQGSVSMGVAAFA 337
            D + RLGGDEF+ +  +   +    +  ++  AI++  IS +N +  + S SMGV  + 
Sbjct: 429 HDAIGRLGGDEFVAVLRDVEDS---TVYSRILEAIRRP-ISYQNAV-MKLSASMGVTVYP 483

Query: 338 SNMKDHHELLRAADQAVYLAKNSGKNRVCAFGAPS 372
            + +D   LLR ADQA+Y AK+SGK+    F   S
Sbjct: 484 DDAEDPDTLLRHADQAMYAAKDSGKDTYSLFDLAS 518