Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  109 bits (272), Expect = 2e-28
 Identities = 63/172 (36%), Positives = 98/172 (56%), Gaps = 3/172 (1%)

Query: 199 NRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHD 258
           NRQL+ +++TD LT LPNRR    Q   ++ LA   Q PF  ++ D D FK +ND+ GH+
Sbjct: 455 NRQLQTIALTDYLTQLPNRRHIYAQAEQYFQLALKQQIPFSIIIFDADHFKKINDNFGHE 514

Query: 259 VGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQ-QVI 317
           +GD+ L TIA   +      +LV R+GG+EFL++ P T+      +A ++   I +   I
Sbjct: 515 IGDQALLTIAEASKTLTTDRNLVGRIGGEEFLILLPNTDADRAWKLAHELQTLITRFGAI 574

Query: 318 SLENNIRWQGSVSMGVAAFASNMKDHH--ELLRAADQAVYLAKNSGKNRVCA 367
           +L   ++   S  +      S ++D +   LL+ AD A+Y AKN+G+N V A
Sbjct: 575 NLPVELKLTVSAGVATLPIQSELQDQNFARLLKRADNALYEAKNAGRNCVKA 626