Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  121 bits (304), Expect = 2e-32
 Identities = 73/174 (41%), Positives = 100/174 (57%), Gaps = 6/174 (3%)

Query: 201 QLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHDVG 260
           ++  LS  D LTGL NRR   R L   W  +Q  Q P   +M+D+D FK  NDH GH VG
Sbjct: 142 EIADLSEHDPLTGLANRRLFTRFLHNEWRRSQREQTPLSLIMLDLDNFKTCNDHLGHQVG 201

Query: 261 DKVLTTIANMLRDHF-RSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISL 319
           D  L  +  +L+    R  DL CR GGDEF++I   T+     +IA ++CRAI+     +
Sbjct: 202 DDSLQMVGRILKSFCQRPADLPCRFGGDEFVLILGNTDRENAQHIAGEICRAIKTLDFVI 261

Query: 320 ENNIRWQGSVSMGVAAFASNM-KDHHELLRAADQAVYLAKNSGKNRVCAFGAPS 372
           +++IR   S S+GVA   +N+ +   +LL AAD A+Y+AK SGKN  C  G  S
Sbjct: 262 QDDIRL--SASIGVATLYANLGESETQLLTAADAALYVAKRSGKN--CFHGVHS 311