Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., GGDEF domain/HAMP domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  108 bits (271), Expect = 3e-28
 Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 4/172 (2%)

Query: 200 RQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHHGHDV 259
           R LE +++TD LTGL NRR    +     ++     +P  C+M DID FK +ND +GH+ 
Sbjct: 350 RALERMAVTDQLTGLHNRRYVAVEGAKVVDVCWRGGRPCSCLMADIDRFKTINDTYGHEA 409

Query: 260 GDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQVISL 319
           GD VL   A + R   R  D+  R GG+EF+VI P  +T   V IAE++       V+  
Sbjct: 410 GDAVLQAFAEVFRGGLRWSDIGARHGGEEFVVIAPNADTRDAVVIAERLRVDAAALVVEF 469

Query: 320 ENNIRWQGSVSMGVAAFASNMKDHH---ELLRAADQAVYLAKNSGKNRVCAF 368
             ++  + +VS+GVA+   +  D +   ELLR AD A+Y AK  G++RVC +
Sbjct: 470 GGHV-IRFTVSVGVASLDEHGGDGNLLEELLRRADTALYRAKAEGRDRVCVW 520