Pairwise Alignments

Query, 372 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 975 a.a., diguanylate cyclase (GGDEF)-like protein from Paraburkholderia graminis OAS925

 Score =  116 bits (290), Expect = 3e-30
 Identities = 76/234 (32%), Positives = 122/234 (52%), Gaps = 5/234 (2%)

Query: 138 GMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRE--LVKLNQSLEEKVIERTQQL 195
           GM A ++Y+ +        E L      +   +S R+    L   N  LE +V ERT++L
Sbjct: 469 GMLAVQSYSPDVHYTPRDQELLTFVSRHIDTALSRRSAADALHAANVELEARVQERTREL 528

Query: 196 YQVNRQLEALSMTDSLTGLPNRRKAMRQLVLHWNLAQDNQQPFVCVMIDIDGFKAVNDHH 255
            + N QL   +  D+LTGLPNRR  + +L   W   +D  Q  + + +D+D FK VND  
Sbjct: 529 DEANAQLWHENFHDALTGLPNRRYLLERLGAEWTRHRDAGQQLIVMFLDLDRFKVVNDSL 588

Query: 256 GHDVGDKVLTTIANMLRDHFRSDDLVCRLGGDEFLVICPETNTAGGVYIAEQVCRAIQQQ 315
           GH  GD++L + A  LRD      ++ RLGGDEF ++  E +    + +AE++  A    
Sbjct: 589 GHHFGDQLLVSAATRLRDCLADKCMLARLGGDEFAILSAEASVEDAIELAERILSAFDVP 648

Query: 316 VISLENNIRWQGSVSMGVAAFASNMK-DHHELLRAADQAVYLAKNSGKNRVCAF 368
             S+ +++ +  S S+G+ +   +   +  +LLR AD A+Y AKN G++    F
Sbjct: 649 -FSIGDHVVF-SSCSIGIVSADDDFHGEPADLLRDADTAMYRAKNGGRDSYVVF 700



 Score = 25.8 bits (55), Expect = 0.005
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 128 MARQVIAIRSGMSAEEA--YAKEEREKNAATEPLLNALNALFDQVSERNRELVKLNQSLE 185
           +A QV  +    SAE+   +         A + +L+  N L + V+ R  EL +LN +L 
Sbjct: 275 LAMQVYDVSRSYSAEDRALFLVVAGHVAMALDRILHRAN-LEETVTRRTSELSELNTALR 333

Query: 186 EKVIER 191
           ++V+ER
Sbjct: 334 QEVMER 339