Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 674 a.a., excinuclease ABC subunit C from Sinorhizobium meliloti 1021

 Score =  399 bits (1024), Expect = e-115
 Identities = 230/617 (37%), Positives = 343/617 (55%), Gaps = 28/617 (4%)

Query: 10  FLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNIAKIDVT 69
           F+K + N PGVYRM N   +V+YVGKA+ LKKR+++Y +    S +   +V   A ++  
Sbjct: 58  FVKRLPNGPGVYRMLNEAGDVLYVGKARSLKKRVSNYAQGRGHSNRIARMVRETAHMEFV 117

Query: 70  VTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAH-KHPRLSSHRGAKKRRGEY 128
            T TE EAL+LE N IK+  P++NVLLRDDKS+PYI ++   + P L  HRGA+ R+G+Y
Sbjct: 118 TTRTEIEALLLEANLIKRLRPRFNVLLRDDKSFPYIVVTGDTRAPALYKHRGARSRKGDY 177

Query: 129 FGPYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGLISDQGY 188
           FGP+  +GAV  T++ +Q+ F +R C D+V+  RTRPCL+YQI RC+ PC    +SD  Y
Sbjct: 178 FGPFASAGAVGRTINSLQRAFLLRTCTDSVFETRTRPCLLYQIKRCSAPCTNE-VSDADY 236

Query: 189 QEIVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDD 248
            E+V   + FL GK   V + +   M +AS  L FE AA  RD++ A+  VQ  Q ++  
Sbjct: 237 AELVSEAKDFLSGKSQAVKATIASAMAEASENLDFERAALYRDRLAALSHVQSHQGINPA 296

Query: 249 SLEDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFLSQYYLSH 308
            +E+ DV     E GI+CI +   R G+  G+R++FPK        EV  +FL+Q+Y   
Sbjct: 297 GVEEADVFATHHEGGISCIQVFFFRTGQNWGNRAYFPKADPSIPPAEVLSAFLAQFY--- 353

Query: 309 SEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLANTNALTAI 368
            + +  P +++L   + EE E L  A+SE +G KV+  V   G +   ++ A  NA  A 
Sbjct: 354 -DDKPCPRQVLLCAPV-EEQELLAQALSEKSGYKVSILVPQRGEKKDLVEHALANAREAH 411

Query: 369 TTKMNHKMTISQRFKALQEELGMDAI-TRMECFDISHTMGESTMASCVVFNQEGPLKQEY 427
             K+    +  +  +       +  +  R+E +D SH MG + +   VV   EG +K +Y
Sbjct: 412 GRKLAETASQGRLLEGFAATFQLPYVPRRIEIYDNSHIMGTNAVGGMVVAGPEGFVKGQY 471

Query: 428 RRYNI--TGITGGDDYAAMAQVLERRYSKQLDSS----------------KIPDIIFIDG 469
           R++NI  T IT GDD+  M +V+ RR+S+ L                     PD+I IDG
Sbjct: 472 RKFNIKSTDITPGDDFGMMREVMTRRFSRLLKEEGKPDRSAEPGEDAGFPAWPDVILIDG 531

Query: 470 GKGQLNRAYEIISSCWQDWPKYPKIIGIAKGVTRKPGLETLITIDGDEFHLPSDAPALHL 529
           G+GQ+     I+     +       IG+AKGV R  G E       + F LP   P L+ 
Sbjct: 532 GQGQMTAVRTILKELGIE--DCVTAIGVAKGVDRDAGRERFFAEGRESFTLPPRDPVLYF 589

Query: 530 IQHIRDESHNHAIAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEE 589
           IQ +RDE+H  AI  HRA+R K    + L+ I G+GP R++ALL + G  + + RA + +
Sbjct: 590 IQRLRDEAHRFAIGSHRARRKKEMVKNPLDEIAGIGPTRKRALLTHFGTAKAVSRAGIND 649

Query: 590 IAKVPGISHALAENIYQ 606
           +  V GIS  +A  +Y+
Sbjct: 650 LMSVNGISETVARIVYE 666