Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., uvrABC system protein C from Phaeobacter inhibens DSM 17395

 Score =  408 bits (1048), Expect = e-118
 Identities = 227/607 (37%), Positives = 356/607 (58%), Gaps = 22/607 (3%)

Query: 10  FLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNIAKIDVT 69
           +LKT+ + PGVYRM ++E+ V+YVGKA++L+ R+++Y R    S + + +++  A +   
Sbjct: 27  YLKTLDSSPGVYRMLDSESRVLYVGKARNLRARVSNYSRPG-HSPRIERMIAATASMMFL 85

Query: 70  VTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSA-HKHPRLSSHRGAKKRRGEY 128
            T TETEAL+LE N IKQ  PKYNVLLRDDKS+P I ++  H  P++  HRG ++ +G Y
Sbjct: 86  TTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILVAKDHAFPQIKKHRGTRREKGSY 145

Query: 129 FGPYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGLISDQGY 188
           FGP+  +GAV  TL+ +QK F +R C + ++ +RTRPCL YQI RC  PC  G IS + Y
Sbjct: 146 FGPFASAGAVNRTLNQLQKAFLLRNCTNAMFESRTRPCLQYQIKRCTAPCT-GEISAEDY 204

Query: 189 QEIVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDD 248
              V     FL G+  ++   L E+M  AS  + FE AA  RD+I+A+ +VQ  Q ++  
Sbjct: 205 ASSVRDAERFLSGRSTKIQEELAEQMAAASEAMEFERAAALRDRIKALTQVQTSQGINPR 264

Query: 249 SLEDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFLSQYYLSH 308
            + + DV+G   ++G AC+ +  IR  +  G++  +P+I  D S  EV E+F+ Q+Y   
Sbjct: 265 GVAEADVIGLHLDSGQACVQVFFIRANQNWGNQDFYPRINGDVSPAEVMEAFIGQFY--- 321

Query: 309 SEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLANTNALTAI 368
            + +  P ++IL+  + E  + ++ A+S+ AGR+V   V   G +   +  A  NA  ++
Sbjct: 322 -DNKEPPRQLILSDEI-ENGDLMEQALSDKAGRRVEILVPQRGEKTELVAGAVRNARESL 379

Query: 369 TTKMNHKMTISQRFKALQEELGMDAIT-RMECFDISHTMGESTMASCVVFNQEGPLKQEY 427
             +M    T ++  + + E  G++    R+E +D SH  G   +   +V   EG +K  Y
Sbjct: 380 ARRMAESATQAKLLRGVAEAFGLEGPPQRIEVYDNSHIQGSHAVGGMIVAGPEGFMKNAY 439

Query: 428 RRYNITG--ITGGDDYAAMAQVLERRYSKQL------DSSKIPDIIFIDGGKGQLNRAYE 479
           R++NI G  +T GDD+  M +VL RR+S+ L      +    PD++ IDGG GQ++   E
Sbjct: 440 RKFNIRGDDLTPGDDFGMMKEVLNRRFSRLLKEDPDREKGLWPDLLLIDGGAGQVSAVAE 499

Query: 480 IISSCW-QDWPKYPKIIGIAKGVTRKPGLETLITIDGDEFHLPSDAPALHLIQHIRDESH 538
           I++    QD P    +IG+AKGV R  G E    +    F L  + P L+ +Q +RDE+H
Sbjct: 500 IMAEHGVQDIP----MIGVAKGVDRDHGKEEFHRLGAPAFALQRNDPVLYFVQRMRDEAH 555

Query: 539 NHAIAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPGISH 598
             AI  HRA+R K    + L+ + GVG  R++ALL + G  + + RA++ ++  V G+S 
Sbjct: 556 RFAIGTHRAKRAKAMGATPLDEVPGVGAARKRALLAHFGSAKAVSRANLSDLKAVEGVSA 615

Query: 599 ALAENIY 605
           ALA+ IY
Sbjct: 616 ALAQRIY 622