Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Probable excinuclease ABC (subunit C-nuclease) UvrC from Mycobacterium tuberculosis H37Rv

 Score =  337 bits (863), Expect = 1e-96
 Identities = 216/635 (34%), Positives = 331/635 (52%), Gaps = 55/635 (8%)

Query: 17  QPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLD-SEKTKALVSNIAKIDVTVTHTET 75
           +PGVYR  +    VIYVGKAK L+ RLTSYF      + +T+ LV+  AK++ TV  TE 
Sbjct: 17  EPGVYRFRDQHGRVIYVGKAKSLRSRLTSYFADVASLAPRTRQLVTTAAKVEWTVVGTEV 76

Query: 76  EALILEHNYIKQYLPKYNVLLRDDKSYPYIFLS-AHKHPRLSSHRGAKKRRGEYFGPYPD 134
           EAL LE+ +IK++ P++NV  RDDKSYP + ++   + PRL  +RG +++   YFGPY  
Sbjct: 77  EALQLEYTWIKEFDPRFNVRYRDDKSYPVLAVTLGEEFPRLMVYRGPRRKGVRYFGPYSH 136

Query: 135 SGAVRETLHLIQKIFPVRQCEDTVYSNRT---RPCLMYQIGRCAGPCVKGLISDQGYQEI 191
           + A+RETL L+ ++FP R C   V+       RPCL+  I +C+ PC+ G +    +++I
Sbjct: 137 AWAIRETLDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCSAPCI-GRVDAAQHRQI 195

Query: 192 VHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDDSLE 251
           V     FL GK ++    L ++M  A+ +L FE AA+ RD + A++R  E+Q V      
Sbjct: 196 VADFCDFLSGKTDRFARALEQQMNAAAEQLDFERAARLRDDLSALKRAMEKQAVVLGDGT 255

Query: 252 DLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDT--SQVEVFESFLSQYY---- 305
           D DV+ FA +   A + +  +R G+V G R    + P +   S +++ E FL+Q+Y    
Sbjct: 256 DADVVAFADDELEAAVQVFHVRGGRVRGQRGWIVEKPGEPGDSGIQLVEQFLTQFYGDQA 315

Query: 306 ----LSHSEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLAN 361
                +   A  +P R +L   L    E L   +S L G +V   V   G +    +  +
Sbjct: 316 ALDDAADESANPVP-REVLVPCLPSNAEELASWLSGLRGSRVVLRVPRRGDKRALAETVH 374

Query: 362 TNALTAITTKMNHKMTISQRFKA-------LQEELGM-DAITRMECFDISHTMGESTMAS 413
            NA  A+     HK+  +  F A       +Q+ LG+ DA  R+EC D+SH  G   + S
Sbjct: 375 RNAEDAL---QQHKLKRASDFNARSAALQSIQDSLGLADAPLRIECVDVSHVQGTDVVGS 431

Query: 414 CVVFNQEGPLKQEYRRYNITGITG---GDDYAAMAQVLERRYSKQLDSSKIPDII----- 465
            VVF    P K +YR + I    G    DD A +A+V  RR+ + L     PD++     
Sbjct: 432 LVVFEDGLPRKSDYRHFGIREAAGQGRSDDVACIAEVTRRRFLRHLRDQSDPDLLSPERK 491

Query: 466 -----------FIDGGKGQLNRAYEIISSCWQDWPKYPKIIGIAKGVTRKPGLETLITID 514
                       +DGG  Q+N A  +I            +IG+AK +      E  +  +
Sbjct: 492 SRRFAYPPNLYVVDGGAPQVNAASAVIDELGVT---DVAVIGLAKRLE-----EVWVPSE 543

Query: 515 GDEFHLPSDAPALHLIQHIRDESHNHAIAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLK 574
            D   +P ++  L+L+Q +RDE+H  AI  HR++R      S L+ + G+G  RR+AL+ 
Sbjct: 544 PDPIIMPRNSEGLYLLQRVRDEAHRFAITYHRSKRSTRMTASALDSVPGLGEHRRKALVT 603

Query: 575 YLGGMQELKRASVEEIAKVPGISHALAENIYQALK 609
           + G +  LK A+V+EI  VPGI  A A  ++ AL+
Sbjct: 604 HFGSIARLKEATVDEITAVPGIGVATATAVHDALR 638