Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., excinuclease ABC subunit C from Marinobacter adhaerens HP15

 Score =  603 bits (1554), Expect = e-177
 Identities = 323/611 (52%), Positives = 427/611 (69%), Gaps = 13/611 (2%)

Query: 4   QFDSAPFLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNI 63
           +FDS  FLK +T +PGVYRMY+    V+YVGKA++LKKR+ SYFRK   + KT+ALV  I
Sbjct: 14  EFDSKSFLKQLTERPGVYRMYDEGGSVLYVGKARNLKKRVGSYFRKTGLAPKTEALVGKI 73

Query: 64  AKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHK-HPRLSSHRG-A 121
           A I+VT+T +ETEAL+LE N IK   P YN+LLRDDKSYPYI+LS+H  +P L+  RG  
Sbjct: 74  ASIEVTITGSETEALLLEQNLIKSLRPPYNILLRDDKSYPYIYLSSHSDYPSLTFRRGRT 133

Query: 122 KKRRGEYFGPYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKG 181
           KK  G +FGP+P SGAV+E+L+++QKIF +R C ++ + NRTRPCL YQI RC  PCV+ 
Sbjct: 134 KKGGGTWFGPFPSSGAVKESLNVLQKIFRIRNCSESFFRNRTRPCLQYQINRCTAPCVE- 192

Query: 182 LISDQGYQEIVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQE 241
            I+ + YQ+ + +  +FL+GK+  +L  L+  ME AS+ L FE AA  RDQI  +R VQE
Sbjct: 193 YITPEEYQQDIRHATMFLEGKNPAILHDLMNAMEAASKNLEFEKAAAYRDQINHLRHVQE 252

Query: 242 QQFVSDDSLEDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFL 301
           QQ V D    D DV+  AQ+ GI CI ++++R G+VLG++ +FP+   + ++ E+  +FL
Sbjct: 253 QQSV-DGEGGDADVIAIAQDAGIVCIVVIIVRGGRVLGTKDYFPRYSIEQTEGELLSAFL 311

Query: 302 SQYYLSHSEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLAN 361
            QYY   +  R IP R IL     E  E L  A+SE A R+     N  G R R+L+LA 
Sbjct: 312 GQYYFGGNTRREIP-RDILVPVEVEGQELLAQALSESANRETRIRGNVRGERRRWLELAM 370

Query: 362 TNALTAITTKMNHKMTISQRFKALQEELGM-DAITRMECFDISHTMGESTMASCVVFNQE 420
           TNA   + T +  K T+ +R  AL++ L + +  +RMECFDISH+ GE+T+ASCVVF++ 
Sbjct: 371 TNARQTLLTHLASKETVYRRLLALRDLLELSETPSRMECFDISHSHGENTVASCVVFDEN 430

Query: 421 GPLKQEYRRYNITGITGGDDYAAMAQVLERRYSKQL-DSSKIPDIIFIDGGKGQLNRAYE 479
           GPLK +YR YNI G+T GDDYAAM QVL RRY + +    K PD++FIDGGKGQLN A E
Sbjct: 431 GPLKSDYRLYNIEGVTAGDDYAAMRQVLSRRYKRMVAGEGKRPDLVFIDGGKGQLNIARE 490

Query: 480 IISSC-WQDWPKYPKIIGIAKGVTRKPGLETLI-TIDGDEFHLPSDAPALHLIQHIRDES 537
           +       D P    +IG+AKGVTR+ G+E LI  + GD F +P+D+PALHLIQHIRDES
Sbjct: 491 VFDELEISDIP----LIGVAKGVTRRAGMEQLIDAMTGDVFRVPADSPALHLIQHIRDES 546

Query: 538 HNHAIAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPGIS 597
           H  AI GHRA+R K RR STLEGIEGVGPK+R+ L++Y GG+QEL++A V+E+ KV GIS
Sbjct: 547 HRFAITGHRARRDKKRRQSTLEGIEGVGPKKRRDLIRYFGGIQELRKAGVDEMTKVQGIS 606

Query: 598 HALAENIYQAL 608
            +LAE IY AL
Sbjct: 607 KSLAETIYAAL 617