Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., excinuclease ABC subunit UvrC from Pantoea sp. MT58

 Score =  790 bits (2040), Expect = 0.0
 Identities = 396/611 (64%), Positives = 480/611 (78%), Gaps = 4/611 (0%)

Query: 1   MSTQFDSAPFLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALV 60
           M+  FDS  FL TVT++PGVYRMY+A   VIYVGKAKDLKKRLTSYFR  + S KT+ALV
Sbjct: 1   MNDVFDSKAFLSTVTSKPGVYRMYDASGTVIYVGKAKDLKKRLTSYFRVQVGSRKTEALV 60

Query: 61  SNIAKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHKHPRLSSHRG 120
           SNI  IDVTVTHTETEAL+LEHNYIK Y P+YNVLLRDDKSYPYIFLS+  HPRL+ HRG
Sbjct: 61  SNIQHIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPYIFLSSDTHPRLAMHRG 120

Query: 121 AKKRRGEYFGPYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVK 180
           AK  +GEYFGP+P+  AVRETL L+QK+FP+RQCE++VY NR+RPCL YQIGRC GPCV 
Sbjct: 121 AKHAKGEYFGPFPNGYAVRETLGLLQKVFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVA 180

Query: 181 GLISDQGYQEIVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQ 240
           GL+S++ Y +   Y+RLFL GKD+QVL+ LV+ ME+AS  LRFE+AA+ RDQIQA+RR+ 
Sbjct: 181 GLVSEEEYAQQTDYVRLFLAGKDDQVLNQLVKHMEEASIGLRFEEAARLRDQIQAVRRIT 240

Query: 241 EQQFVSDDSLEDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESF 300
           E+QFVS+   +DLDV+G A E G+AC+H+L IRQGKVLGSRS+FPK+P DT   EV ++F
Sbjct: 241 EKQFVSNQG-DDLDVMGVAYEAGMACLHVLFIRQGKVLGSRSYFPKVPVDTDLAEVVQTF 299

Query: 301 LSQYYLSHSEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLA 360
           + Q+YL  SEAR++P  I+L+  L E  E L  ++SELAGR+V     P G R RYLKLA
Sbjct: 300 VGQFYLQGSEARTLPGDILLDFTLPER-ELLAESLSELAGRRVNIQSKPRGDRARYLKLA 358

Query: 361 NTNALTAITTKMNHKMTISQRFKALQEELGMDAITRMECFDISHTMGESTMASCVVFNQE 420
            TNA TA+TT+++   TI QR  AL E L +D ITRMECFDISHTMGE T+ASCVVF+Q 
Sbjct: 359 RTNAATALTTRLSQHSTIHQRLNALAEFLELDKITRMECFDISHTMGEQTIASCVVFDQN 418

Query: 421 GPLKQEYRRYNITGITGGDDYAAMAQVLERRYSKQLDSSKIPDIIFIDGGKGQLNRAYEI 480
           GPL+ +YRRYNITGIT GDDYAAM QVL RRY K ++  KIPD+I IDGGKGQL++A ++
Sbjct: 419 GPLRADYRRYNITGITPGDDYAAMNQVLRRRYGKAIEEDKIPDVILIDGGKGQLSQAIQV 478

Query: 481 ISSCWQDWPK-YPKIIGIAKGVTRKPGLETL-ITIDGDEFHLPSDAPALHLIQHIRDESH 538
            +     W K  P ++G+AKG  RK GLETL    +G+   +P DAPALH+IQHIRD++H
Sbjct: 479 FAELDVPWDKNQPILLGVAKGSDRKAGLETLFFEAEGEGVSMPPDAPALHVIQHIRDDAH 538

Query: 539 NHAIAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPGISH 598
           NHAI+GHR +R K + TS LE IEGVGPKRRQ LLKY+GG+Q L  ASVEEIA VPGISH
Sbjct: 539 NHAISGHRKKRAKVKNTSALESIEGVGPKRRQQLLKYMGGLQPLMNASVEEIANVPGISH 598

Query: 599 ALAENIYQALK 609
           ALAE IY +LK
Sbjct: 599 ALAEKIYYSLK 609