Pairwise Alignments

Query, 610 a.a., excinuclease ABC subunit C from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., UvrABC system protein C from Burkholderia phytofirmans PsJN

 Score =  269 bits (687), Expect = 4e-76
 Identities = 127/281 (45%), Positives = 190/281 (67%), Gaps = 1/281 (0%)

Query: 5   FDSAPFLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKNLDSEKTKALVSNIA 64
           F+    L  + + PGVYR Y+    V+YVGKA+DLKKR++SYF K L S +   +V+ IA
Sbjct: 10  FEPKKVLAQLPHLPGVYRYYDTHGAVLYVGKARDLKKRVSSYFTKTLLSPRIAMMVTRIA 69

Query: 65  KIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDKSYPYIFLSAHKHPRLSSHRGAKKR 124
           +I+ TVT +E EAL+LE+N IK   P+YN+L RDDKSYPY+ L+ HK PR++ +RGA  R
Sbjct: 70  RIETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTGHKFPRMAYYRGAVDR 129

Query: 125 RGEYFGPYPDSGAVRETLHLIQKIFPVRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGLIS 184
           + +YFGP+P + AVRE++ ++Q++F +R CED+V++NRTRPCL++QIGRC  PCV   I+
Sbjct: 130 KNQYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFNNRTRPCLLHQIGRCTAPCV-AAIN 188

Query: 185 DQGYQEIVHYLRLFLQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQF 244
           ++ Y   V     FL G+  +V+  L +KM   + EL+FE AA  R+Q+ ++  V  QQ 
Sbjct: 189 EEDYARDVANASRFLLGRQGEVMKELEQKMHAFASELKFEQAAAVRNQMSSLSTVLHQQA 248

Query: 245 VSDDSLEDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFP 285
           +   S  D+D+L      G  C+++ M+R G+ LG +++FP
Sbjct: 249 IEVGSDSDVDILAVVALGGRVCVNLAMVRGGRHLGDKAYFP 289



 Score =  242 bits (617), Expect = 5e-68
 Identities = 168/453 (37%), Positives = 236/453 (52%), Gaps = 68/453 (15%)

Query: 199 LQGKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQE-----QQFVSDDSLEDL 253
           LQ  D  + S+ +     A  ++  ++ A   D   A+   QE     ++   +D+ E++
Sbjct: 303 LQEDDAALASVALASNSLAGDDVIDDETAALADTADALAIAQEMPSEDEENEQNDAAEEV 362

Query: 254 DVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESFLSQYYLSHSEARS 313
           DV   A+E G                ++    +  +   + EV E+F++Q+YL +   R 
Sbjct: 363 DV---AEEAGSE-------------PAKPRKGRAATGGIEAEVLEAFIAQHYLGN---RV 403

Query: 314 IPARIILNRGLTEETEALQIAISELAGRKVTFHVNPTGTRGRYLKLANTNALTAITTKMN 373
            P  ++ +     E   L   + E AG KVT    P G R  +L +A  NA  A+   ++
Sbjct: 404 PPVLVVSHAPANRE---LVDVLIEQAGHKVTVLRQPQGQRRAWLTMAEQNARLALARLLS 460

Query: 374 HKMTISQRFKALQEELGMD----AITRMECFDISHTMGESTMASCVVFNQEGPLKQEYRR 429
            + +   R +AL + LGM+    A  R+ECFDISHTMGE+T ASCVV++       EYRR
Sbjct: 461 EQGSQQARTRALTDTLGMECDDLAHLRIECFDISHTMGEATQASCVVYHHHKMQSSEYRR 520

Query: 430 YNITGITGGDDYAAMAQVLERRYSKQLDSSK----------------------------- 460
           YNITGIT GDDYAAM QVL RRY K ++ +                              
Sbjct: 521 YNITGITPGDDYAAMRQVLTRRYEKMVEQAAANAADEAAELQSDAAADPSLTPDAAEPVA 580

Query: 461 ----IPDIIFIDGGKGQLNRAYEIISSCWQDWPKYPKIIGIAKGVTRKPGLETLITIDGD 516
               +P I+ IDGGKGQ+  A ++ +    D      ++G+AKG  RK GLETLI  DG 
Sbjct: 581 AGGILPTIVLIDGGKGQVEIARQVFTELGLDTGM---LVGVAKGEGRKVGLETLIFADGR 637

Query: 517 E-FHLPSDAPALHLIQHIRDESHNHAIAGHRAQRGKTRRTSTLEGIEGVGPKRRQALLKY 575
               L  ++ AL L+  IRDE+H  AI G RA+RGKTR+TS LE +EGVG KRRQ LL  
Sbjct: 638 APLELGKESAALMLVAQIRDEAHRFAITGMRAKRGKTRQTSRLEELEGVGAKRRQRLLAR 697

Query: 576 LGGMQELKRASVEEIAKVPGISHALAENIYQAL 608
            GG++ +  ASVE++A V GIS ALAE IY+ L
Sbjct: 698 FGGLRGVVAASVEDLASVEGISQALAEQIYRQL 730