Pairwise Alignments

Query, 214 a.a., two-component system response regulator UvrY from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., DNA-binding response regulator, LuxR family from Pseudomonas fluorescens FW300-N1B4

 Score =  124 bits (310), Expect = 2e-33
 Identities = 72/210 (34%), Positives = 119/210 (56%), Gaps = 3/210 (1%)

Query: 1   MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGI 60
           M  V +VDDH ++R  +R ++E   G +V  E D+G +A++  R    D++++D+ +P +
Sbjct: 1   MNKVLIVDDHPVIRLAVRMLMER-HGYEVIAETDNGVDALQLARDLMPDIVILDIGIPKL 59

Query: 61  GGLEATKKLLRVNPDIKIIVLTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHS 120
            GLE   +L      +K+++LT      F  + MQ+GAAGY+ K     E+++AI+ V S
Sbjct: 60  DGLEVIARLTSTAMPLKVLILTSQAPGHFSMRCMQSGAAGYVCKQQDLTELLSAIKAVLS 119

Query: 121 GQRYISPEIAQQMALSQFSPASENPFAD-LSERELQIMLMITKGQKVTDISEQLSLSPKT 179
           G  Y  P  A     S    ASE    D LS RE+ ++  + +G+   +I++ + LS KT
Sbjct: 120 GYSYF-PNQALHTVRSSLGNASEADMVDRLSGREMMVLQQLARGKTNKEIADGMFLSNKT 178

Query: 180 VNSYRYRLFAKLNINGDVELTHLAIRHGIL 209
           V++Y+ RL  KLN    V+L  LA R+G++
Sbjct: 179 VSTYKTRLLLKLNARSLVDLIELAQRNGLV 208