Pairwise Alignments

Query, 787 a.a., DNA polymerase II from Vibrio cholerae E7946 ATCC 55056

Subject, 785 a.a., DNA polymerase II from Klebsiella michiganensis M5al

 Score =  790 bits (2039), Expect = 0.0
 Identities = 414/789 (52%), Positives = 544/789 (68%), Gaps = 17/789 (2%)

Query: 6   GFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFIEQSASQEVMRIAAELSITP 65
           GF+LTRH RD    T++  WLAT  GP ++T+  +  V FI +S   +V R+    +   
Sbjct: 7   GFLLTRHWRDTPQGTELTFWLATDDGPLEVTLPPQESVAFIAESQRPQVERLLQGEN-GH 65

Query: 66  SLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLMERFIQGS 125
            LA L+L+ F  QP+   YC   R    L +KL +  + + E DIR  +R+LMERFI   
Sbjct: 66  RLAALNLQDFHRQPVFGLYCRAHRQLMRLEKKLRENGVTVYEGDIRPPERYLMERFITAP 125

Query: 126 IEFTGQITDFGHYRQVQQAKCRQGD-YLPTLNMVSLDIECSEKGLLYSIGLDSPMDSRVI 184
           +   G+       +Q+  A+ +    Y P L  VSLDIE S  G LY IGL+      V 
Sbjct: 126 VWVEGEARG----QQLVNARMKPNPHYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVY 181

Query: 185 MIGQPEPAETP-----IQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAE 239
           M+G PEPA  P     +++V     LL+ L AWF   DPDV+IGW+VV FD R+L K AE
Sbjct: 182 MLG-PEPATPPAVDFTLEYVASRPLLLEKLNAWFAAHDPDVLIGWNVVQFDLRVLQKHAE 240

Query: 240 FHKLKLTIGRAQQPSFFRTAS-QTQQGFISIPGRVVLDGIDTLKTATYHFRSWSLESVSQ 298
            +++ L +GR      +R    +    F    GR+++DGI+ LK+A ++F S++LESV++
Sbjct: 241 RYRIPLMLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFALESVAR 300

Query: 299 ELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAIQRSRL 358
           ELLGEGKAI N  DRMDEI++ F HDKP+LA YNLQDC LV +IF  T ++ F ++R+ +
Sbjct: 301 ELLGEGKAIDNPWDRMDEIDRRFHHDKPALATYNLQDCELVTRIFHKTEIMPFLLERATV 360

Query: 359 TGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYDSVLVL 418
            G+  DR GGSVAAF++LY P++HR GYVAPNL      ASPGGYVMDS PGLYDSVLVL
Sbjct: 361 NGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGAVPPQASPGGYVMDSRPGLYDSVLVL 420

Query: 419 DFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMIEKLWA 478
           D+KSLYPSIIR+FLIDP+GL+EGL  P      H+  GF G +F R KH LP ++ ++W 
Sbjct: 421 DYKSLYPSIIRTFLIDPVGLVEGLAHP---DDAHSTEGFLGARFSREKHCLPGIVGQIWH 477

Query: 479 ARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIE 538
            RDEAK+++ K  SQA+KIIMN+FYGVLG+S CRFFD RLASSITMRGH IM QTK LIE
Sbjct: 478 GRDEAKQHKNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIE 537

Query: 539 ARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSILELEY 598
           ++GY VIYGDTDSTFV L   +S +EA +IG +LV  +N+WW   L ++  L S LELE+
Sbjct: 538 SQGYDVIYGDTDSTFVWLKRAHSDEEASSIGRSLVAFVNEWWAAELAKD-GLASTLELEF 596

Query: 599 ETHYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQRFQHQLYQ 658
           ETH+ RFLMPTIRG++TGSKKRYAG+  + D ++++FKGLE+ RTDWTPLAQ+FQ +LY 
Sbjct: 597 ETHFCRFLMPTIRGADTGSKKRYAGMIQEADEQRMVFKGLETVRTDWTPLAQQFQQELYL 656

Query: 659 LIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARMADDINA 718
            IF  Q    Y+R  +++ + G+LDD+LVY+KRLRR L EYQ+NVPP VRAAR+AD+ N 
Sbjct: 657 RIFRHQPYRDYVRETIDKLMNGELDDRLVYRKRLRRPLAEYQRNVPPHVRAARLADEQNV 716

Query: 719 KLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFIGKQFDE 778
           +LGRP QYQ RG+I+YV T  GPEP +Y +SP+DY+HY+ KQL+PVA+ ILPF+   F  
Sbjct: 717 RLGRPQQYQQRGSIKYVWTTGGPEPVDYQQSPLDYEHYLSKQLEPVAEGILPFVDDDFAT 776

Query: 779 LIAPQLGLF 787
           ++  QLGLF
Sbjct: 777 IVTGQLGLF 785