Pairwise Alignments

Query, 787 a.a., DNA polymerase II from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., DNA polymerase-2 from Paraburkholderia graminis OAS925

 Score =  789 bits (2038), Expect = 0.0
 Identities = 412/795 (51%), Positives = 541/795 (68%), Gaps = 18/795 (2%)

Query: 2   KIEQGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFI---EQSASQEVMRIA 58
           K+EQGF+LTRH RD    T+++ WLAT  GP  + +R +  V F+   ++   + ++R  
Sbjct: 5   KLEQGFILTRHWRDTPAGTEVDFWLATDGGPRHVRLRHQTSVAFVPAEQRERVESILRRE 64

Query: 59  AELSITPSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQADMLILEADIRLADRFLM 118
           A L     L PL LR F  +P+   YC   R       +L Q  + + EADI   +R++M
Sbjct: 65  APLD----LRPLELRDFHHRPVMGLYCPQYRQLTGQERRLKQGGVDVYEADIFPPERYMM 120

Query: 119 ERFIQGSIEFTGQITDFGHYRQVQQAKCRQGDYLPTLNMVSLDIECSEKGLLYSIGLDSP 178
           ERFI   + F G+    G     +       DY P+L +VSLDIE S    LYSI L+  
Sbjct: 121 ERFITAPVWFGGEPQSDGTLINGELKPA--ADYRPSLKLVSLDIETSVHAELYSIALEGC 178

Query: 179 MDSRVIMIGQPE----PAETPIQWVEDEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLL 234
              +V M+G P       +  +++ E   QLL+ L  W E+ DPD IIGW++V FD R+L
Sbjct: 179 GQRQVYMLGPPNGDASQLDFDLEYCETRAQLLEKLNTWIERHDPDAIIGWNLVQFDLRVL 238

Query: 235 HKRAEFHKLKLTIGRAQQPSFFRTASQTQQG-FISIPGRVVLDGIDTLKTATYHFRSWSL 293
            + AE +++ L +GR      +R     Q   F    GR+++DGI+ L++AT+ F S+SL
Sbjct: 239 QQHAEQYRVPLKLGRGGAVMEWREHGLKQNHYFAGAAGRLIIDGIEALRSATWSFPSFSL 298

Query: 294 ESVSQELLGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLDFAI 353
           E VSQ +LGEGK+I N + RMDEI + F  DKP+LARYNL+DC LV +IFA T LL F +
Sbjct: 299 EHVSQAVLGEGKSIDNPYQRMDEIQRRFDEDKPALARYNLKDCELVTRIFAKTELLPFLL 358

Query: 354 QRSRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASPGGYVMDSIPGLYD 413
           +R+ +TG+  DR GGSVAAFT+LY+P++HR GYVAPN+      ASPGG+VMDS PGLYD
Sbjct: 359 ERATVTGLPADRSGGSVAAFTHLYMPRMHRQGYVAPNIGDVAGAASPGGFVMDSRPGLYD 418

Query: 414 SVLVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQADHAVPGFRGGQFHRTKHFLPEMI 473
           SVLVLD+KSLYPSIIR+FLIDP+GL+EG+  P     D +VPGF G +F RT+H LP ++
Sbjct: 419 SVLVLDYKSLYPSIIRTFLIDPVGLVEGMLNP---GDDQSVPGFLGARFSRTRHCLPSIV 475

Query: 474 EKLWAARDEAKRNQEKAFSQAIKIIMNSFYGVLGSSGCRFFDARLASSITMRGHEIMIQT 533
            ++W  R+ AKR   K  SQA+KIIMN+FYGVLGS+GCRFFD RLASSITMRGHEIM +T
Sbjct: 476 SQVWQGRETAKREHNKPLSQALKIIMNAFYGVLGSTGCRFFDPRLASSITMRGHEIMHRT 535

Query: 534 KRLIEARGYQVIYGDTDSTFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSI 593
           + LI+A GY+VIYGDTDSTFV L   ++++EA  IG ALV  IN WW + L+Q + L S 
Sbjct: 536 RELIQAEGYEVIYGDTDSTFVWLRHAHNEEEAGRIGRALVEHINAWWRQDLQQRFGLDSA 595

Query: 594 LELEYETHYRRFLMPTIRGSETGSKKRYAGLKGDGD-NEQLIFKGLESARTDWTPLAQRF 652
           LEL++E HYRRF MPTIRG+E GSKKRYAGL    D +E++++KGLE+ RTDWTPLAQ+F
Sbjct: 596 LELQFERHYRRFFMPTIRGAEEGSKKRYAGLTVSADGSEEIVYKGLETVRTDWTPLAQQF 655

Query: 653 QHQLYQLIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQKNVPPQVRAARM 712
           Q +LY+ IF  Q  + Y+R  V  TLAG+LDDQLVY+KRLRR L +Y++NVPP VRAAR+
Sbjct: 656 QQELYRRIFTQQPYQDYVRDYVRDTLAGKLDDQLVYRKRLRRPLGDYERNVPPHVRAARV 715

Query: 713 ADDINAKLGRPLQYQYRGTIEYVITVNGPEPKEYSKSPIDYQHYIDKQLKPVADAILPFI 772
           AD+ N + GRPLQYQ  G I YV+T+ GPEP E  +S IDY+HY+ +QL+PVADAILP +
Sbjct: 716 ADEFNRRQGRPLQYQNGGWISYVMTIAGPEPLETLRSAIDYEHYLTRQLQPVADAILPLL 775

Query: 773 GKQFDELIAPQLGLF 787
              F  L + Q  LF
Sbjct: 776 RDDFTRLTSGQKQLF 790