Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1003 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score =  133 bits (334), Expect = 5e-35
 Identities = 79/233 (33%), Positives = 134/233 (57%), Gaps = 7/233 (3%)

Query: 456 MSSKEFCLEYQPQVCHRTGQVIGCEALIRAKDQQDNILSPATFLPSLAKAGLMKEMDLWV 515
           +++ EF L YQPQV  ++GQ+IG EALIR +  +  ++SP  F+P   + GL+  +  WV
Sbjct: 730 LNNDEFLLLYQPQVDLQSGQIIGVEALIRWQHPELGMVSPIKFIPQAEETGLIVPIGDWV 789

Query: 516 VKQATSDVRKLTNVG-VYVPVSINLTAETLMDLTVMAQIEEIIRSVAGL----IHIELTE 570
           +  A    +   + G   + +S+N++A   ++  ++ ++   ++  +GL    + +ELTE
Sbjct: 790 IHSACRQNKAWQDAGWPPITMSVNISARQFIERDLIDRVMHALQE-SGLDPMYLELELTE 848

Query: 571 ESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLALVSE 630
             ++ D Q+       L  +G+ + IDDFGTGYSSL+ L  F +  +KID+SFV  L   
Sbjct: 849 SLIMQDLQQAISKMKALQAMGISLSIDDFGTGYSSLAALKSFPIARLKIDQSFVRDLPDN 908

Query: 631 KGRKVFANLQL-VAHSLELETIIEGVETQEQLDAMGDEYPFSVQGWFYSKSLN 682
           +  K  A   + + H L L+ I EGVET+EQ   + D     +QG+F+SK+++
Sbjct: 909 ENDKAIATAVISLGHKLNLKVIAEGVETEEQQTFLRDNGCDEIQGYFFSKAVS 961