Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1494 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  128 bits (322), Expect = 2e-33
 Identities = 82/246 (33%), Positives = 134/246 (54%), Gaps = 8/246 (3%)

Query: 454  QMMSSKEFCLEYQPQVCHRTGQVIGCEALIRAKDQQDNILSPATFLPSLAKAGLMKEMDL 513
            Q +  +E  L +QP+     G + G EAL+R   ++   +SPA F+P   + G++ ++  
Sbjct: 1247 QAIVRQELSLVFQPKFRVSDGSITGFEALLRWNSKELGPISPAEFIPLAEEIGIINQLGH 1306

Query: 514  WVVKQATSDVRKLTNVGVY-VPVSINLTAETLMDLTVMAQIEEIIRSVAGL----IHIEL 568
            WVV +A   + +    G   + V++NL+A  L    +++ IE +  +VAGL    + +EL
Sbjct: 1307 WVVNEACRHMAQFAAAGFDDLHVAVNLSARQLK-ADILSTIE-VALAVAGLPAKCLELEL 1364

Query: 569  TEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLALV 628
            TE  ++   Q    V  +L  LGV + +DDFGTGYSSL+YL RF +D +KIDR FV  + 
Sbjct: 1365 TESMIMKSPQESVAVLQRLKALGVSLAVDDFGTGYSSLAYLKRFPLDTLKIDREFVRDIS 1424

Query: 629  SE-KGRKVFANLQLVAHSLELETIIEGVETQEQLDAMGDEYPFSVQGWFYSKSLNRGDFV 687
            ++     +   +  +AHSLEL  + EGVE + QL+ +       VQG+   K +   D +
Sbjct: 1425 TDPDDAAITGAIIALAHSLELNVVAEGVENEAQLEHLRKHGCDQVQGFLLGKPMAARDAM 1484

Query: 688  EFVQRR 693
              ++ R
Sbjct: 1485 ALLKSR 1490