Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 678 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  288 bits (736), Expect = 8e-82
 Identities = 205/695 (29%), Positives = 342/695 (49%), Gaps = 77/695 (11%)

Query: 30  SAMHSIREGMVWLIPCLMISSFVLFIASMGELFSGGRPEWVLILYRA-------NQVIAE 82
           S + ++RE  + L+P L+I++ +     +  + +   PE  L +Y A       +  +  
Sbjct: 11  SFLLAVRESFIALLPFLLINALLALFPVLATVLA---PE--LSVYDAFHWFEGISDTLGR 65

Query: 83  TFPYLMTATISYLLAMHWHLPRPPIALLSI-----IYLVVSSASVSAENNLPTFQIITAL 137
            FP L   ++SY  A +  +     A LS+     +++  S   V ++  L        +
Sbjct: 66  LFPLLAMLSLSYHFAKYLDISAVASATLSLCIIFSLHVHTSGGLVFSDYLLEVLGDPRMV 125

Query: 138 ITPIYAIPLIAWLMRYPVLHLTRSNSAGSIVRESLNLVLPAALTAMVVV----GINLIL- 192
           ITPI A  ++   +++P LH+ RS    + + + LNL++P  LT  +VV     ++L+L 
Sbjct: 126 ITPILAAYIMRHFLKFPQLHMVRSAEISAYLSQHLNLIIPMVLTYTLVVLILKAMSLLLV 185

Query: 193 ------------FGPITRQIFASLMHFDYANDPYSFGLTFASLNSLLWFFGIHGYYALLP 240
                       FGP+ + +F  L                  L  +LW FG+HG  A L 
Sbjct: 186 LGISPMVDAVGEFGPMGQLVFRVL------------------LTHMLWCFGVHGDNAFLL 227

Query: 241 LVELLQEASRLSESYFLIGETAPYPMNLSFMGTFVFIGGSGATFSLALAILLFGKQKNIR 300
           L+        L          AP      FM  FV +GGSGAT  L +AI L  + +  R
Sbjct: 228 LIGDDNGLRYL----------APNLTFSEFMDLFVLLGGSGATIPLLIAIFLESRDEQSR 277

Query: 301 LLAIASLPIGLINVNEIFLFGLPLILNPRLFFPFLLAPMVNVVVSLWAVESGWVAYPSVS 360
            LA  ++P  ++N+NEI ++GLP++ N RL  PF+L P +NV+++  A+ +G++++    
Sbjct: 278 HLAKIAVPFSVVNINEILIYGLPIVFNLRLAIPFVLLPCLNVLIAWMAISAGFLSFDGKP 337

Query: 361 VPFNSPIFLNAWIATSGDWNGLLLQLVNIVLGCLLYLP-----SVLRLNEQYGQQTIRIP 415
            P+ +P+FLN WIA SG +  + LQL  + +G  +Y P     S L    QY ++ I+  
Sbjct: 338 FPWVTPLFLNGWIA-SGGFTVVALQLFLVTVGVFIYRPFIRKYSALADTNQYDRELIKRT 396

Query: 416 SLDTMYTRRQE-EAAHLQDDPIALAQKREREQLKVEQQLQMMSSKEFCLEYQPQVCHRTG 474
            L T   R  E + +  Q + +A ++  ER   +V        S E  + YQP++     
Sbjct: 397 ELQTDIERMAERQYSRNQSETLAASRNLERTVREV-------LSGELLVHYQPKLKLPGQ 449

Query: 475 QVIGCEALIRAKDQQDNILSPATFLPSLAKAGLMKEMDLWVVKQATSDVRKLTNVGVYVP 534
           +V+G EAL+R KD   NI  P  F+ +  +AG    +D +V+     D+R+    G    
Sbjct: 450 EVVGFEALLRLKDADGNIKGP-WFIDNFQRAGYSHVIDRFVINTVAEDLRRWQAAGFSPK 508

Query: 535 VSINLTAETLMDLTVMAQIEEIIRSVAGLIHIELTEESLLADEQRLTWVFNQLHQLGVKI 594
           VSINL    L D+ ++ ++   +   A  + +E+ E + + D Q +     QL  LG + 
Sbjct: 509 VSINLDPNNLNDVLMLDRLRTTLGEFAHQVEVEILERAFMRDLQGINRAIAQLQALGFRF 568

Query: 595 YIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLALVSEKGRKVFANLQLVAHSLELETIIEG 654
            +DDFGTG+SSLS L +  VDGIK+DRS +    +++GR ++  +  +  SL  + + EG
Sbjct: 569 LLDDFGTGFSSLSLLTQITVDGIKLDRSILGKTDTDQGRVLYRQICQLCKSLGFQLVAEG 628

Query: 655 VETQEQLDAMGDEYPFSVQGWFYSKSLNRGDFVEF 689
           VET  +   + D     VQGW Y+K+L +   +E+
Sbjct: 629 VETPSEASFVADAGVDYVQGWLYAKALPQARAMEY 663