Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 680 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  129 bits (323), Expect = 6e-34
 Identities = 77/253 (30%), Positives = 140/253 (55%), Gaps = 8/253 (3%)

Query: 441 KREREQLKVEQQLQ-MMSSKEFCLEYQPQVCHRTGQVIGCEALIRAKDQQDNILSPATFL 499
           +R   +L+ E  L   + + EF L +QP++   TG+V+GCEALIR + +   ++SP +F+
Sbjct: 416 ERAAVRLRTEASLHDALKNDEFVLHFQPKLDLTTGKVMGCEALIRWQ-KDGRLISPMSFI 474

Query: 500 PSLAKAGLMKEMDLWVVKQATSDVRKLTN-VGVYVPVSINLTAETLMDLTVMAQIEEII- 557
           P   + G++  +  WV++Q+   +R         +P+++N+ ++   D +++  I+++  
Sbjct: 475 PVAEETGIIVPIGRWVLEQSCKTLRHWQKQYNFAIPIAVNVASQQFADASLVPDIKQMAL 534

Query: 558 --RSVAGLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVD 615
             +    L+ IE+TE SL++D +       QL   G  I +DDFGTGYSSLSYL    + 
Sbjct: 535 RYQISPDLLEIEITETSLMSDVETAISKLEQLKNAGFGIAVDDFGTGYSSLSYLRHLPIT 594

Query: 616 GIKIDRSFVLALVSEKGRKVFANLQLVAHSLELETIIEGVETQEQLDAMGDEYPFSVQGW 675
            +KIDR FV  L ++    + + + ++   L+L  + EG+E ++QL  +        QG+
Sbjct: 595 TMKIDRCFVTDLPNDSA--IASTILMLGKQLDLRIVAEGIENEQQLQWLKTAGCGIGQGF 652

Query: 676 FYSKSLNRGDFVE 688
           ++S  L   +F E
Sbjct: 653 YFSPPLPMEEFEE 665