Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1484 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  133 bits (335), Expect = 6e-35
 Identities = 88/293 (30%), Positives = 164/293 (55%), Gaps = 15/293 (5%)

Query: 409  QQTIRIPSLD-TMYTRRQEEAAHLQDDPIALAQKRERE---QLKVEQQLQM-MSSKEFCL 463
            Q  + I + D  MY  ++E   + Q      + +R  E    LK+E +L+  M  +EF L
Sbjct: 1191 QPEVLIKNADQAMYHAKEEGRGNFQ----YFSAERNAEALYHLKLEAELRKAMDRQEFEL 1246

Query: 464  EYQPQV-CHRTGQVIGCEALIRAKDQQDNILSPATFLPSLAKAGLMKEMDLWVVKQATSD 522
             +QPQ+   +  +V+G EAL+R    ++  + P  F+      GL+ E+D WV+KQA   
Sbjct: 1247 YFQPQIDILKDDKVVGMEALLRWHHPKEGYIRPDIFIRVAESCGLIIEIDRWVIKQACLQ 1306

Query: 523  VRKLT-NVGVYVPVSINLTAETLMDLTVMAQIEEIIRSV---AGLIHIELTEESLLADEQ 578
              K   + G  + +S+N++A        +  +++ ++     A ++ +E+TE  L+ +  
Sbjct: 1307 GAKWAEHFGDELKLSVNVSAVHFRQPDFIQDVQQALKESGMPAKMLGLEITEGVLMKELH 1366

Query: 579  RLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLAL-VSEKGRKVFA 637
                    L ++G+++ IDDFGTGYSSL+YL  FDV  +KIDRSF++ +  +E  + + +
Sbjct: 1367 VAKDHLKALREIGIEVAIDDFGTGYSSLAYLRSFDVSTLKIDRSFLIDIATNEADQAIAS 1426

Query: 638  NLQLVAHSLELETIIEGVETQEQLDAMGDEYPFSVQGWFYSKSLNRGDFVEFV 690
            ++  +A +L+L+ + EGVETQEQL+ +     + +QG++++K +   +F +++
Sbjct: 1427 SIIELARNLKLKVVAEGVETQEQLEQVFSRGCYIIQGYYFAKPMTIDEFEKYL 1479