Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  144 bits (362), Expect = 2e-38
 Identities = 94/256 (36%), Positives = 143/256 (55%), Gaps = 14/256 (5%)

Query: 445 EQLKVEQQLQMMSSKE-FCLEYQPQVCHRTGQVIGCEALIRAKDQQDNILSPATFLPSLA 503
           E LK++  L    +K+ F L YQP++   TGQ +G EAL+R +D Q   +SPA F+P   
Sbjct: 585 EHLKLQSALHDAINKDAFYLVYQPKLALGTGQCVGFEALLRWEDPQLGTISPAIFIPVAE 644

Query: 504 KAGLMKEMDLWVVKQA-TSDVRKLTNVGVYVPVSINLTAETLMDLTVMAQIEEIIRSVAG 562
             GL+ E+ LWV+KQA T   + L     +  +S+N+    L      AQ++ ++   AG
Sbjct: 645 NIGLINEIGLWVLKQAATQGAQWLAEGKRFGRISVNVAGPQLQQKQFCAQVKRVLDE-AG 703

Query: 563 L----IHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIK 618
           L    + +E+TE  +++D   +  V  QL +LGV++ +DDFGTGYSSL+YL R  +  +K
Sbjct: 704 LPPEYLELEVTESCMMSDPLAVIEVLKQLGELGVELSVDDFGTGYSSLNYLKRLPIHKLK 763

Query: 619 IDRSFVLALVSEKGRKVFANLQL-VAHSLELETIIEGVETQEQ---LDAMGDEYPFSVQG 674
           ID+SF+  +  +      A   + + H+L L  I EGVET EQ   L+A G +     QG
Sbjct: 764 IDQSFIRDIPRDGNNTAIAKAVIALGHALNLCIIAEGVETPEQAAFLEAAGCD---QAQG 820

Query: 675 WFYSKSLNRGDFVEFV 690
           + YSK     +  EF+
Sbjct: 821 YLYSKPRMVEELAEFL 836