Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1094 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  133 bits (334), Expect = 5e-35
 Identities = 81/250 (32%), Positives = 140/250 (56%), Gaps = 20/250 (8%)

Query: 446  QLKVEQQLQM-MSSKEFCLEYQPQVCHRTGQVIGCEALIRAKDQQDNILSPATFLPSLAK 504
            ++ +EQ L+  +   EFCL YQP V   +G+ +  EAL+R +  Q  ++ P  F+P   +
Sbjct: 830  RITLEQSLRSAVLQHEFCLHYQPIVDTSSGEGVALEALLRWRHPQRGLVPPDEFIPIAEE 889

Query: 505  AGLMKEMDLWVVKQATSDVRKLTNVGVYVPVSINLTAETLMD---------LTVMAQIEE 555
             GL++ +  WV++QA  D+R+  + G+ + ++IN++   L           L  + Q  +
Sbjct: 890  TGLIEPIGEWVIQQALRDLRQCHSQGIMINMAINVSGRQLAHGDPSHFACMLNGLLQKYD 949

Query: 556  IIRSVAGLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVD 615
            +       +HIE+TE  L+AD +        +  LGV+IY+DDFGTGYSSLSYL +F + 
Sbjct: 950  VAPQY---VHIEITESILMADTELSLKALTAIRHLGVEIYLDDFGTGYSSLSYLKQFPIS 1006

Query: 616  GIKIDRSFVLALVSEKG-RKVFANLQLVAHSLELETIIEGVETQEQ---LDAMGDEYPFS 671
             IKID+SFV  ++ ++    +   +  +  SL++  + EGVE++ Q   L  +G ++   
Sbjct: 1007 VIKIDKSFVDNMLEDRADANLIKAIITMGQSLDMRLVAEGVESEPQRSFLQGLGCDF--- 1063

Query: 672  VQGWFYSKSL 681
            VQG+  +K +
Sbjct: 1064 VQGYLVAKPM 1073