Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1491 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  131 bits (330), Expect = 2e-34
 Identities = 84/252 (33%), Positives = 145/252 (57%), Gaps = 7/252 (2%)

Query: 447  LKVEQQLQM-MSSKEFCLEYQPQV-CHRTGQVIGCEALIRAKDQQDNILSPATFLPSLAK 504
            L++E  L+  +  +EF L YQPQ+   R  + IG EALIR +   D  + P  F+     
Sbjct: 1230 LRLEADLRKAIERQEFELYYQPQIDILRGDKFIGMEALIRWQHPVDGFVRPDIFIKVAEA 1289

Query: 505  AGLMKEMDLWVVKQATSDVRKLTNVGVY-VPVSINLTAETLMDLTVMAQIEEIIRSV--- 560
             GL+ ++D WV++ A  D  +     +    +S+N++A        +  +++I+ +    
Sbjct: 1290 CGLVVDIDRWVLRCACLDGARWAKQTIEPFKMSVNISAVHFRQPDFIDGVKKILDATHMP 1349

Query: 561  AGLIHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKID 620
            A  + +E+TE  L+ + Q       QL  LG+++ IDDFGTGYSSL+YL  F+VD +KID
Sbjct: 1350 ASSLCLEITEGVLMKELQVAKTHLKQLDDLGIEVAIDDFGTGYSSLAYLRNFEVDTLKID 1409

Query: 621  RSFVLALVSE-KGRKVFANLQLVAHSLELETIIEGVETQEQLDAMGDEYPFSVQGWFYSK 679
            RSF++ + S    + + +++  +A +L+L  I EGVET EQL+ +     + VQG++++K
Sbjct: 1410 RSFLIDIASNGADQAIVSSIIELARNLKLTVIAEGVETVEQLEQLFSRGCYIVQGYYFAK 1469

Query: 680  SLNRGDFVEFVQ 691
             ++  DF +++Q
Sbjct: 1470 PMSVSDFEKYLQ 1481