Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1515 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  151 bits (381), Expect = 3e-40
 Identities = 89/250 (35%), Positives = 146/250 (58%), Gaps = 8/250 (3%)

Query: 454  QMMSSKEFCLEYQPQVCHRTGQVIGCEALIRAKDQQDNILSPATFLPSLAKAGLMKEMDL 513
            Q +S  E  L YQP+ C R G + G EAL+R +  +   +SPA F+P   + G++ ++  
Sbjct: 1263 QAISHNELSLVYQPKFCLRNGSLTGLEALLRWQHSELGPISPAEFIPLAEETGMINQIGH 1322

Query: 514  WVVKQATSDVRKLTNVGVY-VPVSINLTAETLMDLTVMAQIEEIIRSVAGL----IHIEL 568
            WV+ Q+   + +   +G   + +++NL+A  L    +++ IE +  +V+GL    + +EL
Sbjct: 1323 WVINQSCQQLAEWNELGFSDISMAVNLSARQLK-ADIISTIE-VALAVSGLPAKALELEL 1380

Query: 569  TEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGIKIDRSFVLALV 628
            TE  ++ + Q    + ++L  LG+ I +DDFGTGYSSLSYL RF +D +KIDR FV  + 
Sbjct: 1381 TESMIMGNPQESVNILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDIT 1440

Query: 629  SE-KGRKVFANLQLVAHSLELETIIEGVETQEQLDAMGDEYPFSVQGWFYSKSLNRGDFV 687
            ++     + + +  +AHSLEL  + EGVETQEQL+ +  +    VQG+  SK L+  D  
Sbjct: 1441 NDPDDAAITSAIIALAHSLELNVVAEGVETQEQLNFLALQGCDQVQGFLLSKPLSAQDCQ 1500

Query: 688  EFVQRRNASK 697
              +Q+R   +
Sbjct: 1501 TLLQQRTKDR 1510