Pairwise Alignments

Query, 704 a.a., diguanylate phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

Subject, 1077 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (354), Expect = 3e-37
 Identities = 85/245 (34%), Positives = 139/245 (56%), Gaps = 10/245 (4%)

Query: 446  QLKVEQQLQM-MSSKEFCLEYQPQVCHRTGQVIGCEALIRAKDQQDNILSPATFLPSLAK 504
            ++++EQ+L+  ++  EF L YQP V  +TGQ+   EALIR +D    ++ P  F+    +
Sbjct: 806  RMELEQRLRRAVAQDEFTLFYQPIVDMKTGQICSVEALIRWQDPDLGLIPPDQFIAIAEE 865

Query: 505  AGLMKEMDLWVVKQATSDVRKLTNVGVYVPVSINLTAETLMDLTVMAQIEEIIRSVAGL- 563
             GL++ M  WV+ QA  D+R+  ++G+ + V+IN+++   ++   +   +++++      
Sbjct: 866  TGLIEPMGEWVLNQAMHDLRQWQHMGLNLNVAINVSSRQCINTRGIG-FDQVLQECFNRH 924

Query: 564  ------IHIELTEESLLADEQRLTWVFNQLHQLGVKIYIDDFGTGYSSLSYLHRFDVDGI 617
                  +HIE+TE  L+ D          +  LG +IYIDDFGTGYSSLSYL +F +  I
Sbjct: 925  HINPRNVHIEITESMLMGDASHCLSTLESIRHLGSQIYIDDFGTGYSSLSYLKKFPISVI 984

Query: 618  KIDRSFV-LALVSEKGRKVFANLQLVAHSLELETIIEGVETQEQLDAMGDEYPFSVQGWF 676
            KIDRSFV  AL +     +   + ++  SLE+E + EG+ET+ Q   + D      QG+ 
Sbjct: 985  KIDRSFVEHALENCSNANLVKAIVMMGQSLEMELVAEGIETEAQWQFLRDLGCHYAQGYL 1044

Query: 677  YSKSL 681
             SK L
Sbjct: 1045 LSKPL 1049