Pairwise Alignments

Query, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., HTH-type transcriptional regulator, GntR family from Phaeobacter inhibens DSM 17395

 Score =  114 bits (286), Expect = 1e-30
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 5/228 (2%)

Query: 5   YLQIKQFMLDNIESGRWPVGYRTPTELELTEQFGVSRMTVNKALRDLVSEGKLQRRPRLG 64
           +  ++  +L  I+   W  G   PTE +L E+FG +R TVN+ALR+L   G + R+ + G
Sbjct: 22  FQDVRDEVLKRIQDRVWGQGDLLPTEQDLAEEFGCARATVNRALRELADRGIIDRKRKSG 81

Query: 65  TFVCAAEEKAESPLLDIRNIADEILSRGKQYHNKVVEQRALSADEAVAIKLGVMVGSPVF 124
           T V     K     L+I      +  R   Y   +V +  + A   +A +L +   +PV 
Sbjct: 82  TRVAVLPVKQAK--LEITLTRQLVEDRNAIYRYALVHREEIPAPGWLASQLQLAADTPVL 139

Query: 125 YSEIIHYANDIPMQLEVRWVNSRSVPHYLDQDFTQITPNQYLSQNCPLSAIEHTVEAIVA 184
           +   +HY ++ P Q E RW+N  +VP   + DF+ + PN++L    P S  E +  AI A
Sbjct: 140 HIRAMHYGDNQPFQFEDRWINIAAVPSVAEADFSVVGPNEWLLAEVPFSTAELSFGAIAA 199

Query: 185 DAHVKQALALAANEPCLLLNRRTW-SGDKLVSSALLYHPGSRYKLSSK 231
           DA + + LA     P   + R TW     +    + +HPG  Y++ S+
Sbjct: 200 DAALAEYLACPIAAPLFQMERTTWFQAQPVTFVRMSFHPG--YQMRSR 245