Pairwise Alignments

Query, 236 a.a., histidine utilization repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., transcriptional regulator, GntR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 3/232 (1%)

Query: 4   RYLQIKQFMLDNIESGRWPVGYRTPTELELTEQFGVSRMTVNKALRDLVSEGKLQRRPRL 63
           +YL I +++ + I +  +  G + P E +L   FGV RMTV +A+  LV++  L R+   
Sbjct: 5   KYLVIYEWLSEQIRNKVYQPGDKIPNESDLAAMFGVHRMTVRQAIDKLVNDHMLVRKRSK 64

Query: 64  GTFVCAAEEKAESPLLD-IRNIADEILSRGKQYHNKVVEQRALSADEAVAIKLGVMVGSP 122
           GTF+ + +    +  L+ I    D+I+S G   H K +      AD  VA  L +    P
Sbjct: 65  GTFLLSEKSPVLTRSLESITTYYDDIVSAGLAPHYKTIAAGIEYADAEVAAHLNLAERQP 124

Query: 123 VFYSEIIHYANDIPMQLEVRWVNSRSVPHYLDQDF-TQITPNQYLSQNCPLSAIEHTVEA 181
           V +   +  A+ +P+ LE   + +  VP +L++   T +    +      L      + A
Sbjct: 125 VIFLYRLMLASGVPLVLERSILPTDMVPDFLEKKLDTVLYKVLHEDYGMRLLYSRQELGA 184

Query: 182 IVADAHVKQALALAANEPCLLLNRRTWSG-DKLVSSALLYHPGSRYKLSSKI 232
           ++     ++ L +  N PC+ +    ++   + V  +   H G +Y+    I
Sbjct: 185 VMPTESERKHLKIGDNCPCIWVESVVYTDTGRAVEYSRALHRGDKYRFRCAI 236