Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD from Pseudomonas fluorescens FW300-N2E2

 Score =  113 bits (283), Expect = 3e-29
 Identities = 122/494 (24%), Positives = 201/494 (40%), Gaps = 79/494 (15%)

Query: 56  SVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLT--KGVVVDL 113
           S Y+  P  V  P+    V  + K+    +   V    RG GTG +G +L    GV++ +
Sbjct: 62  SAYRTTPLLVALPRRVEQVQALLKLCHGLDVPVVA---RGAGTGLSGGALPLESGVLLVM 118

Query: 114 SRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDAS 173
           +R  N+IL I+P     R+Q GV    ++ A  P G +++PD S+    ++GG V  +A 
Sbjct: 119 AR-FNQILHIDPDARTARLQPGVRNLAISQAAAPFGLYYAPDPSSQIACSIGGNVAENAG 177

Query: 174 GQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQI 233
           G   L+YG T  ++L L+ +  +G  L    S+ L +P                      
Sbjct: 178 GVHCLKYGLTVHNLLKLEILTIEGERLTLG-SEALDSPG--------------------- 215

Query: 234 VAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLV 293
                                      D+  +  G+EG L  ITE  + L P P+   ++
Sbjct: 216 --------------------------LDLLALFTGSEGLLGVITEVTVKLLPRPQVAKVL 249

Query: 294 NVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQ 351
              +DS D A R    ++ A  +   +E +D+  +  A++ I  H+   +       E +
Sbjct: 250 LASFDSVDKAGRAVADIIAAGIIPGGLEMMDNLAIRAAEDFI--HAGYPV-------EAE 300

Query: 352 GINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAV 411
            I + E  G + A ++    ++   L+      QAG    +   D A   R +  RK A 
Sbjct: 301 AILLCELDGVE-ADVHDDCERVRQVLE------QAGATEVRQARDEAERLRFWAGRKNAF 353

Query: 412 GLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPA 471
                A GR  P  +  D  +P   L + +    +L     L      H   G +H    
Sbjct: 354 ----PAVGRLAPDYYCMDGTIPRRALPEVLQRIASLGAEHGLRVANVFHAGDGNMHPLIL 409

Query: 472 LDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYR--SEYGPEFFGEELFTELRRV 529
            D   P +      +  ++++L  + GG + GEHG G    ++   +F  +EL      V
Sbjct: 410 FDANQPGELERAETLGGKILELCVQVGGSITGEHGVGREKINQMCTQFNSDEL-NLFHAV 468

Query: 530 KAAFDPHNKMNPGK 543
           KAAFDP   +NPGK
Sbjct: 469 KAAFDPQGLLNPGK 482