Pairwise Alignments

Query, 1021 a.a., FAD-binding oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) from Pseudomonas stutzeri RCH2

 Score =  118 bits (295), Expect = 1e-30
 Identities = 121/494 (24%), Positives = 206/494 (41%), Gaps = 79/494 (15%)

Query: 56  SVYQQLPQAVVHPKSTADVVLIGKISSKPEFERVTFSPRGGGTGTNGQSLT--KGVVVDL 113
           S Y+  P  VV P+    V  + K+  +     V    RG GTG +G +L   +G+++ +
Sbjct: 50  SAYRTTPLLVVLPERIEQVETLLKLCHQ---RGVPVVARGAGTGLSGGALPLEQGILLVM 106

Query: 114 SRHMNRILEINPQEGWVRVQAGVIKDQLNDAVRPHGFFFSPDLSTSNRATLGGMVNTDAS 173
           +R  N+ILE++P   + RVQ GV    ++ A  P+  +++PD S+    ++GG V  +A 
Sbjct: 107 AR-FNKILEVDPAGRFARVQPGVRNLAISQAAAPYELYYAPDPSSQIACSIGGNVAENAG 165

Query: 174 GQGSLQYGKTSDHVLSLQAVFADGSLLETDLSQGLPAPNTFAAQAMQVTEQVCRTKRKQI 233
           G   L+YG T  ++L +  +  +G  +    S  L +P                      
Sbjct: 166 GVHCLKYGLTVHNLLKVDILTVEGERMTLG-SDALDSPG--------------------- 203

Query: 234 VAKFPPLNRFLTGYDLKNALNEAEDRFDITRVLCGAEGSLAFITEAKLNLTPIPKARTLV 293
                                     FD+  +  G+EG L  +TE  + L P P+   ++
Sbjct: 204 --------------------------FDLLALFTGSEGMLGIVTEVTVKLLPKPQVAKVL 237

Query: 294 NVKYDSFDSALRNAPLMVEAKAL--SVETVDSKVLNLAKEDIIWHSVKDLLTDVPGKEMQ 351
              +DS + A R    ++ A  +   +E +D+  +  A++ I  H+   +       + +
Sbjct: 238 LAAFDSVEKAGRAVGDIIAAGIIPGGLEMMDNLSIRAAEDFI--HAGYPV-------DAE 288

Query: 352 GINMVEYAGQDSAQINQQVAQLTARLDEMMANQQAGIIGYQVCSDLASINRIYNMRKKAV 411
            I + E  G     +   V    AR+ E++  + AG    ++  D A   R +  RK A 
Sbjct: 289 AILLCELDG-----VEADVHDDCARVSEVL--KLAGATEVRLAKDEAERVRFWAGRKNAF 341

Query: 412 GLLGAAKGRAKPVAFTEDTCVPPENLADFIVEFRALLDSKNLAYGMFGHVDAGVLHVRPA 471
                A GR  P  +  D  +P   L   +     L +   L      H   G +H    
Sbjct: 342 ----PAVGRISPDYYCMDGTIPRRELPGVLKGISDLSEQFGLRVANVFHAGDGNMHPLIL 397

Query: 472 LDLCDPKQELLMREISDQVVKLVAKYGGLMWGEHGKGYR--SEYGPEFFGEELFTELRRV 529
            D   P +     ++  ++++L  K GG + GEHG G    ++   +F  +EL T    V
Sbjct: 398 FDANQPGELERAEDLGGKILELCVKVGGSITGEHGVGREKINQMCSQFNADEL-TLFHAV 456

Query: 530 KAAFDPHNKMNPGK 543
           KAAFDP   +NPGK
Sbjct: 457 KAAFDPSGLLNPGK 470